Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth B]d2c2vb2 Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
A [auth B]d2c2vb3 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth E]d2c2ve_ Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth H]d2c2vh_ Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
G [auth K]d2c2vk2 Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
G [auth K]d2c2vk3 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth C]d2c2vc1 Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth F]d2c2vf_ Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth I]d2c2vi_ Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
H [auth L]d2c2vl_ Alpha and beta proteins (a+b) UBC-like UBC-like UBC-related Ubiquitin conjugating enzyme, UBC Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
I [auth S]d2c2vs1 Small proteins RING/U-box RING/U-box U-box STIP1 homology and U box-containing protein 1, STUB1 Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
J [auth T]d2c2vt_ Small proteins RING/U-box RING/U-box automated matches automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
K [auth U]d2c2vu_ Small proteins RING/U-box RING/U-box automated matches automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
L [auth V]d2c2vv_ Small proteins RING/U-box RING/U-box automated matches automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyUBC-like 8034195 3000570 SCOP2B (2022-06-29)
C [auth E]SCOP2B SuperfamilyUBC-like 8034195 3000570 SCOP2B (2022-06-29)
E [auth H]SCOP2B SuperfamilyUBC-like 8034195 3000570 SCOP2B (2022-06-29)
G [auth K]SCOP2B SuperfamilyUBC-like 8034195 3000570 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyUBC-like 8036580 3000570 SCOP2B (2022-06-29)
D [auth F]SCOP2B SuperfamilyUBC-like 8036580 3000570 SCOP2B (2022-06-29)
F [auth I]SCOP2B SuperfamilyUBC-like 8036580 3000570 SCOP2B (2022-06-29)
H [auth L]SCOP2B SuperfamilyUBC-like 8036580 3000570 SCOP2B (2022-06-29)
I [auth S]SCOP2B SuperfamilyRING/U-box like 8039132 3000160 SCOP2B (2022-06-29)
J [auth T]SCOP2B SuperfamilyRING/U-box like 8039132 3000160 SCOP2B (2022-06-29)
K [auth U]SCOP2B SuperfamilyRING/U-box like 8039132 3000160 SCOP2B (2022-06-29)
L [auth V]SCOP2B SuperfamilyRING/U-box like 8039132 3000160 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]UQ_cone2c2vB1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
C [auth E]UQ_cone2c2vE1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
E [auth H]UQ_cone2c2vH1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
G [auth K]UQ_cone2c2vK1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
B [auth C]UQ_cone2c2vC1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
D [auth F]UQ_cone2c2vF1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
F [auth I]UQ_cone2c2vI1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
H [auth L]UQ_cone2c2vL1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
I [auth S]U-boxe2c2vS1 A: few secondary structure elementsX: RING/U-box-likeH: RING/U-box-likeT: RING/U-boxF: U-boxECOD (1.6)
J [auth T]U-boxe2c2vT1 A: few secondary structure elementsX: RING/U-box-likeH: RING/U-box-likeT: RING/U-boxF: U-boxECOD (1.6)
K [auth U]U-boxe2c2vU1 A: few secondary structure elementsX: RING/U-box-likeH: RING/U-box-likeT: RING/U-boxF: U-boxECOD (1.6)
L [auth V]U-boxe2c2vV1 A: few secondary structure elementsX: RING/U-box-likeH: RING/U-box-likeT: RING/U-boxF: U-boxECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
C [auth E],
E [auth H],
G [auth K]
PF00179Ubiquitin-conjugating enzyme (UQ_con)Ubiquitin-conjugating enzymeProteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].
Domain
B [auth C],
D [auth F],
F [auth I],
H [auth L]
PF00179Ubiquitin-conjugating enzyme (UQ_con)Ubiquitin-conjugating enzymeProteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].
Domain
I [auth S],
J [auth T],
K [auth U],
L [auth V]
PF04564U-box domain (U-box)U-box domainThe U-box is a domain of ~70 amino acids that is present in proteins from yeast to human. It consists of the beta-beta-alpha-beta-alpha- fold typical of U-box and RING domains. The central alpha helix is flanked by two prominent surface-exposed loop ...The U-box is a domain of ~70 amino acids that is present in proteins from yeast to human. It consists of the beta-beta-alpha-beta-alpha- fold typical of U-box and RING domains. The central alpha helix is flanked by two prominent surface-exposed loop regions. This domain is one class of E3 ligases, involved in the ubiquitination process [1-3]. This domain is related to the Ring finger Pfam:PF00097 but lacks the zinc binding residues [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
C [auth E],
E [auth H],
G [auth K]
Ubiquitin-conjugating enzyme E2 N
B [auth C],
D [auth F],
F [auth I],
H [auth L]
Ubiquitin-conjugating enzyme E2 variant 1-
I [auth S],
J [auth T],
K [auth U],
L [auth V]
STIP1 homology and U box-containing protein 1