Structure of the E. coli PaaI protein from the phyenylacetic acid degradation operon
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2fs2b2 | Alpha and beta proteins (a+b) | Thioesterase/thiol ester dehydrase-isomerase | Thioesterase/thiol ester dehydrase-isomerase | PaaI/YdiI-like | Phenylacetic acid degradation protein PaaI | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| B | d2fs2b3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| A | d2fs2a1 | Alpha and beta proteins (a+b) | Thioesterase/thiol ester dehydrase-isomerase | Thioesterase/thiol ester dehydrase-isomerase | PaaI/YdiI-like | Phenylacetic acid degradation protein PaaI | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| A | d2fs2a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Staphylokinase | e2fs2B1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Staphylokinase | ECOD (v294.1) |
| A | 4HBT | e2fs2A1 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase | T: Thioesterase/thiol ester dehydrase-isomerase | F: 4HBT | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (4.3.0) |
| A | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03061 | Thioesterase superfamily (4HBT) | Thioesterase superfamily | This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (EC 3.1.2.23) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR052723 | Acyl-coenzyme A thioesterase PaaI | Family | |
| IPR029069 | HotDog domain superfamily | Homologous Superfamily | |
| IPR006683 | Thioesterase domain | Domain | |
| IPR003736 | Phenylacetic acid degradation-related domain | Domain | |
| IPR011973 | Phenylacetic acid degradation protein PaaD | Family |














