2GF4

Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2gf4a1	All alpha proteins	immunoglobulin/albumin-binding domain-like	Vng1086c-like	Vng1086c-like	Nypothetical protein Vng1086c	(Halobacterium salinarum NRC-1 ) [TaxId: 64091 ],	SCOPe (2.08)
B	d2gf4b_	All alpha proteins	immunoglobulin/albumin-binding domain-like	Vng1086c-like	Vng1086c-like	Nypothetical protein Vng1086c	(Halobacterium salinarum NRC-1 ) [TaxId: 64091 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Vng1086c-like	8029451	4001188	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Vng1086c-like	8041830	3001019	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Vng1086c-like	8041830	3001019	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UPF0058_1st	e2gf4A1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: Vng1086c-like (From Topology)	T: Vng1086c-like	F: UPF0058_1st	ECOD (1.6)
B	UPF0058_1st	e2gf4B1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: Vng1086c-like (From Topology)	T: Vng1086c-like	F: UPF0058_1st	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1270.110	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak	Chain:A	CATH (4.3.0)
B	1.20.1270.110	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak	Chain:A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01893	Uncharacterised protein family UPF0058 (UPF0058)	Uncharacterised protein family UPF0058	This archaebacterial protein has no known function.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Protein Vng1086c	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036519	Uncharacterised UPF0058 superfamily	Homologous Superfamily
A, B	IPR002753	Uncharacterised protein family UPF0058	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.