2GR8 | pdb_00002gr8

Hia 1022-1098

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2gr8a1	Alpha and beta proteins (a+b)	Pili subunits	Pili subunits	YadA C-terminal domain-like	Adhesin Hia	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
A	d2gr8a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
B	d2gr8b2	Alpha and beta proteins (a+b)	Pili subunits	Pili subunits	YadA C-terminal domain-like	Adhesin Hia	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
B	d2gr8b3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
C	d2gr8c2	Alpha and beta proteins (a+b)	Pili subunits	Pili subunits	YadA C-terminal domain-like	Adhesin Hia	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
C	d2gr8c3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
D	d2gr8d2	Alpha and beta proteins (a+b)	Pili subunits	Pili subunits	YadA C-terminal domain-like	Adhesin Hia	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
D	d2gr8d3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
E	d2gr8e2	Alpha and beta proteins (a+b)	Pili subunits	Pili subunits	YadA C-terminal domain-like	Adhesin Hia	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
E	d2gr8e3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
F	d2gr8f2	Alpha and beta proteins (a+b)	Pili subunits	Pili subunits	YadA C-terminal domain-like	Adhesin Hia	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)
F	d2gr8f3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Haemophilus influenzae ) [TaxId: 727 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YadA C-terminal domain-like	8029628	4003448	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Pili subunits	8042007	3000097	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Pili subunits	8042007	3000097	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Pili subunits	8042007	3000097	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Pili subunits	8042007	3000097	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Pili subunits	8042007	3000097	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Pili subunits	8042007	3000097	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	e2gr8A1	A: Pili subunits	X: Pili subunits	H: Pili subunits	T: YadA_anchor	F:	ECOD (20:10:01)
B	e2gr8B1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: NTP_transf_2, PAP_NTPase	F:	ECOD (20:10:01)
C	e2gr8C1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: NTP_transf_2, PAP_NTPase	F:	ECOD (20:10:01)
D	e2gr8D1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: NTP_transf_2, PAP_NTPase	F:	ECOD (20:10:01)
E	e2gr8E1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: NTP_transf_2, PAP_NTPase	F:	ECOD (20:10:01)
F	e2gr8F1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: NTP_transf_2, PAP_NTPase	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.1300.30	Alpha Beta	2-Layer Sandwich	Pantoate--beta-alanine Ligase	Chain: A,domain 2	CATH (4.3.0)
B	3.30.1300.30	Alpha Beta	2-Layer Sandwich	Pantoate--beta-alanine Ligase	Chain: A,domain 2	CATH (4.3.0)
C	3.30.1300.30	Alpha Beta	2-Layer Sandwich	Pantoate--beta-alanine Ligase	Chain: A,domain 2	CATH (4.3.0)
D	3.30.1300.30	Alpha Beta	2-Layer Sandwich	Pantoate--beta-alanine Ligase	Chain: A,domain 2	CATH (4.3.0)
E	3.30.1300.30	Alpha Beta	2-Layer Sandwich	Pantoate--beta-alanine Ligase	Chain: A,domain 2	CATH (4.3.0)
F	3.30.1300.30	Alpha Beta	2-Layer Sandwich	Pantoate--beta-alanine Ligase	Chain: A,domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Adhesin	-	localization establishment of protein localization protein transport transport macromolecule localization intracellular protein localization establishment of localization	cell surface cellular anatomical structure cell periphery cell outer membrane external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR040482	Trimeric autotransporter adhesin, Trp ring domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR008635	Trimeric autotransporter adhesin YadA-like, stalk domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR028230	Trimeric autotransporter adhesin, tryptophan-ring motif	Domain
A, B, C, D, E A, B, C, D, E, F	IPR037174	Trimeric adhesin	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR005594	Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR024973	ESPR domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR054742	Autotransporter adhesin NhhA, Trp-ring domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR029275	Trimeric autotransporter adhesin, putative GIN domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR045584	Pilin-like	Homologous Superfamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Outer Membrane Autotransporters	Hia_1022-1098 trimeric autotransporter

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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