2IG8 | pdb_00002ig8

Crystal structure of a Protein of Unknown Function PA3499 from Pseudomonas aeruginosa


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHomeobox_KNe2ig8A1 A: alpha bundlesX: Globin-likeH: Globin-likeT: Globin-likeF: Homeobox_KNECOD (develop294)
CMarRe2ig8C1 A: alpha bundlesX: HTHH: NudixT: winged helix domainF: MarRECOD (develop294)
BMarRe2ig8B1 A: alpha bundlesX: HTHH: NudixT: winged helix domainF: MarRECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1330.40 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
C3.30.1330.40 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
B3.30.1330.40 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01042Endoribonuclease L-PSP (Ribonuc_L-PSP)Endoribonuclease L-PSPEndoribonuclease active on single-stranded mRNA. Inhibits protein synthesis by cleavage of mRNA [1]. Previously thought to inhibit protein synthesis initiation [2]. This protein may also be involved in the regulation of purine biosynthesis [3]. Yjg ...Endoribonuclease active on single-stranded mRNA. Inhibits protein synthesis by cleavage of mRNA [1]. Previously thought to inhibit protein synthesis initiation [2]. This protein may also be involved in the regulation of purine biosynthesis [3]. YjgF (renamed RidA) family members are enamine/imine deaminases. They hydrolyze reactive intermediates released by PLP-dependent enzymes, including threonine dehydratase [5]. YjgF also prevents inhibition of transaminase B (IlvE) in Salmonella [4].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR035959RutC-like superfamilyHomologous Superfamily
A, B, C
IPR006175YjgF/YER057c/UK114 familyFamily