Annotations: 2IQH

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2iqha1	Multi-domain proteins (alpha and beta)	Flu NP-like	flu NP-like	Flu NP-like	Nucleocapsid protein	(Influenza A virus (A/Wilson-Smith/1933(H1N1)) ) [TaxId: 381518 ],	SCOPe (2.08)
C	d2iqhc1	Multi-domain proteins (alpha and beta)	Flu NP-like	flu NP-like	Flu NP-like	Nucleocapsid protein	(Influenza A virus (A/Wilson-Smith/1933(H1N1)) ) [TaxId: 381518 ],	SCOPe (2.08)
B	d2iqhb1	Multi-domain proteins (alpha and beta)	Flu NP-like	flu NP-like	Flu NP-like	Nucleocapsid protein	(Influenza A virus (A/Wilson-Smith/1933(H1N1)) ) [TaxId: 381518 ],	SCOPe (2.08)

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Flu NP-like	8022195	4002613	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Flu NP-like	8034575	3001484	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	Flu NP-like	8034575	3001484	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Flu NP-like	8034575	3001484	SCOP2B (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Flu_NP	e2iqhA1	A: alpha bundles	X: Helical bundle in flu nucleocapsid protein	H: Helical bundle in flu nucleocapsid protein	T: Helical bundle in flu nucleocapsid protein	F: Flu_NP	ECOD (v295)
A	Flu_NP	e2iqhA2	A: few secondary structure elements	X: Flu NP-like	H: Flu NP-like	T: Flu NP-like	F: Flu_NP	ECOD (v295)
C	Gag_p24_C	e2iqhC1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Gag_p24_C	ECOD (v295)
C	Acetyltransf_9	e2iqhC2	A: alpha arrays	X: RuvA-C	H: post-HMGL domain-like	T: post-HMGL domain-like	F: Acetyltransf_9	ECOD (v295)
B	Gag_p24_C	e2iqhB1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Gag_p24_C	ECOD (v295)
B	Acetyltransf_9	e2iqhB2	A: alpha arrays	X: RuvA-C	H: post-HMGL domain-like	T: post-HMGL domain-like	F: Acetyltransf_9	ECOD (v295)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Nucleocapsid protein	structural molecule activity RNA binding binding nucleic acid binding identical protein binding protein binding	biological process involved in interspecies interaction between organisms viral penetration into host nucleus intracellular transport of virus viral process viral life cycle transport of virus biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host biological process involved in interaction with host	host cellular component cellular anatomical structure host cell other organism part host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid host cellular component cellular anatomical structure host cell other organism part host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component helical viral capsid