2IZ1
6PDH complexed with PEX inhibitor synchrotron data
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | 6PGD | e2iz1B1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: 6PGD | ECOD (1.6) |
B | NAD_binding_2 | e2iz1B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
A | 6PGD | e2iz1A1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: 6PGD | ECOD (1.6) |
A | NAD_binding_2 | e2iz1A2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
C | 6PGD | e2iz1C1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: 6PGD | ECOD (1.6) |
C | NAD_binding_2 | e2iz1C2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00393 | 6-phosphogluconate dehydrogenase, C-terminal domain (6PGD) | 6-phosphogluconate dehydrogenase, C-terminal domain | This family represents the C-terminal all-alpha domain of 6-phosphogluconate dehydrogenase. The domain contains two structural repeats of 5 helices each. | Domain | |
PF03446 | NAD binding domain of 6-phosphogluconate dehydrogenase (NAD_binding_2) | NAD binding domain of 6-phosphogluconate dehydrogenase | The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006115 | 6-phosphogluconate dehydrogenase, NADP-binding | Domain | |
IPR006114 | 6-phosphogluconate dehydrogenase, C-terminal | Domain | |
IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR006184 | 6-phosphogluconate-binding site | Binding Site | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR006113 | 6-phosphogluconate dehydrogenase, decarboxylating | Family | |
IPR013328 | 6-phosphogluconate dehydrogenase, domain 2 | Homologous Superfamily | |
IPR006183 | 6-phosphogluconate dehydrogenase | Family |