Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2nr4a1 | All beta proteins | Split barrel-like | FMN-binding split barrel | MTH863-like | Hypothetical protein MM1853 | (Methanosarcina mazei ) [TaxId: 2209 ], | SCOPe (2.08) |
| B | d2nr4b_ | All beta proteins | Split barrel-like | FMN-binding split barrel | MTH863-like | Hypothetical protein MM1853 | (Methanosarcina mazei ) [TaxId: 2209 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | MTH863-like | 8022452 | 4001792 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | FMN-binding split barrel | 8034832 | 3000856 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | FMN-binding split barrel | 8034832 | 3000856 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e2nr4A1 | A: cradle loop barrel | X: RIFT-related | H: FMN-binding split barrel | T: DUF447_N | F: | ECOD (20:10:01) | |
| A | e2nr4A2 | A: Spectrin repeat-like | X: MTH_863 C-terminal domain-like | H: MTH_863 C-terminal domain-like | T: DUF447_C | F: | ECOD (20:10:01) | |
| B | e2nr4B1 | A: Cloacin translocation domain | X: Cloacin translocation domain | H: Cloacin translocation domain | T: Trypsin | F: | ECOD (20:10:01) | |
| B | e2nr4B2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.30.110.10 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
| A | 1.20.58.290 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
| B | 2.30.110.10 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
| B | 1.20.58.290 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Conserved hypothetical protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR012349 | FMN-binding split barrel | Homologous Superfamily | |
| IPR007386 | DUF447, N-terminal domain | Domain | |
| IPR049288 | DUF447, C-terminal domain | Domain |
