2RGN | pdb_00002rgn

Crystal Structure of p63RhoGEF complex with Galpha-q and RhoA

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d2rgnc1	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	G proteins	RhoA	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
F	d2rgnf1	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	G proteins	RhoA	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2rgna1	All alpha proteins	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Rat (Rattus norvegicus ) [TaxId: 10116 ], house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d2rgna2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	G proteins	Transducin (alpha subunit)	Rat (Rattus norvegicus ) [TaxId: 10116 ], house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D	d2rgnd1	All alpha proteins	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Rat (Rattus norvegicus ) [TaxId: 10116 ], house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D	d2rgnd2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	G proteins	Transducin (alpha subunit)	Rat (Rattus norvegicus ) [TaxId: 10116 ], house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Ras-like P-loop GTPases	8057414	3002022	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ras-like P-loop GTPases	8057414	3002022	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ras-like P-loop GTPases	8056800	3002022	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ras-like P-loop GTPases	8056800	3002022	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Galpha insert domain-like	8056801	3000669	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ras-like P-loop GTPases	8056800	3002022	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Galpha insert domain-like	8056801	3000669	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ras-like P-loop GTPases	8056800	3002022	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C		e2rgnC1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: GBP	F:	ECOD (20:10:01)
F		e2rgnF1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: GBP	F:	ECOD (20:10:01)
E		e2rgnE3	A: POZ domain	X: POZ domain	H: POZ domain	T: Rttp106-like_middle	F:	ECOD (20:10:01)
B		e2rgnB1	A: Alpha-beta plaits	X: SH3	H: SH3	T: Bac_DnaA	F:	ECOD (20:10:01)
A		e2rgnA1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
A		e2rgnA2	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: GBP	F:	ECOD (20:10:01)
D		e2rgnD1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
D		e2rgnD2	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: GBP	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
F	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
E	1.20.900.10	Mainly Alpha	Up-down Bundle	Dbl Homology Domain	Chain A	CATH (4.3.0)
E	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)
B	1.20.900.10	Mainly Alpha	Up-down Bundle	Dbl Homology Domain	Chain A	CATH (4.3.0)
B	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
A	1.10.400.10	Mainly Alpha	Orthogonal Bundle	GI Alpha 1, domain 2-like	GI Alpha 1, domain 2-like	CATH (4.3.0)
D	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
D	1.10.400.10	Mainly Alpha	Orthogonal Bundle	GI Alpha 1, domain 2-like	GI Alpha 1, domain 2-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C, F	PF00071	Ras family (Ras)	Ras family	Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ...	Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].	Domain
B, E	PF22697	SOS1/NGEF-like PH domain (SOS1_NGEF_PH)	SOS1/NGEF-like PH domain	This is a PH domain found in a diverse group of animal proteins such as Ephexin-1, SOS1 from human and related RhoGEFs [1-5].	Domain
B, E	PF00621	RhoGEF domain (RhoGEF)	RhoGEF domain	Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Also called Dbl-homologous (DH) domain. It appears that Pfam:PF00169 domains invariably occur C-terminal to RhoGEF/DH domains.	Domain
A, D	PF00503	G-protein alpha subunit (G-alpha)	G-protein alpha subunit	G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...	G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F	Transforming protein RhoA	pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein binding kinase binding enzyme binding protein kinase binding cytoskeletal protein binding myosin binding G protein activity molecular function regulator activity	membrane organization cytoskeleton-dependent cytokinesis cytokinesis cleavage furrow formation cellular component organization cytokinetic process membrane invagination cellular process cell cycle cell division cellular component organization or biogenesis plasma membrane invagination cell cycle process regulation of cytokinesis membrane organization cytoskeleton-dependent cytokinesis cytokinesis cleavage furrow formation cellular component organization cytokinetic process membrane invagination cellular process cell cycle cell division cellular component organization or biogenesis plasma membrane invagination cell cycle process regulation of cytokinesis regulation of biological process regulation of cellular process positive regulation of cell division regulation of cell cycle process biological regulation positive regulation of biological process positive regulation of cell cycle regulation of cell division positive regulation of cytokinesis positive regulation of cell cycle process regulation of cell cycle positive regulation of cellular process developmental process multicellular organismal process head development cellular developmental process forebrain generation of neurons forebrain development animal organ development brain development nervous system development forebrain radial glial cell differentiation generation of neurons neurogenesis multicellular organism development gliogenesis central nervous system development glial cell differentiation cell differentiation anatomical structure development radial glial cell differentiation system development cell population proliferation regulation of cell population proliferation regulation of osteoblast proliferation osteoblast proliferation response to peptide response to stimulus response to chemical response to chemokine response to cytokine cellular response to cytokine stimulus cellular response to chemokine cellular response to stimulus intracellular receptor signaling pathway response to lipid signaling hormone-mediated signaling pathway intracellular signal transduction cell communication cellular response to endogenous stimulus response to hormone response to steroid hormone androgen receptor signaling pathway signal transduction nuclear receptor-mediated steroid hormone signaling pathway cellular response to steroid hormone stimulus steroid hormone receptor signaling pathway cellular response to hormone stimulus response to endogenous stimulus cellular response to chemical stimulus cellular response to lipid nuclear receptor-mediated signaling pathway endothelial cell migration cell migration cell motility cell adhesion substrate adhesion-dependent cell spreading cell-substrate adhesion cerebral cortex cell migration pallium development cerebral cortex development telencephalon cell migration forebrain cell migration telencephalon development anatomical structure morphogenesis cell morphogenesis chemotaxis negative chemotaxis taxis response to external stimulus locomotion odontogenesis animal organ morphogenesis negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction negative regulation of cell communication negative regulation of intracellular steroid hormone receptor signaling pathway regulation of intracellular signal transduction regulation of intracellular steroid hormone receptor signaling pathway negative regulation of cellular process regulation of signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of response to stimulus regulation of cell communication negative regulation of locomotion regulation of cell motility cell migration involved in sprouting angiogenesis regulation of blood vessel endothelial cell migration angiogenesis negative regulation of endothelial cell migration negative regulation of blood vessel endothelial cell migration tube morphogenesis regulation of cell migration regulation of endothelial cell migration blood vessel endothelial cell migration negative regulation of cell migration blood vessel development blood vessel morphogenesis tube development regulation of cell migration involved in sprouting angiogenesis sprouting angiogenesis vasculature development circulatory system development regulation of locomotion anatomical structure formation involved in morphogenesis negative regulation of cell motility negative regulation of cell migration involved in sprouting angiogenesis regulation of protein modification process positive regulation of phosphorylation regulation of catalytic activity regulation of protein phosphorylation positive regulation of protein metabolic process regulation of transferase activity positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of protein serine/threonine kinase activity positive regulation of metabolic process positive regulation of molecular function positive regulation of protein modification process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of protein kinase activity phosphorus metabolic process protein modification process positive regulation of protein phosphorylation protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process positive regulation of catalytic activity primary metabolic process regulation of protein kinase activity regulation of macromolecule metabolic process regulation of molecular function positive regulation of kinase activity regulation of kinase activity macromolecule modification regulation of protein serine/threonine kinase activity regulation of phosphorylation regulation of phosphorus metabolic process metabolic process macromolecule metabolic process regulation of metabolic process small GTPase-mediated signal transduction Rho protein signal transduction intracellular signaling cassette heart development heart valve development aortic valve development heart valve morphogenesis aortic valve formation semi-lunar valve development aortic valve morphogenesis heart valve formation regulation of leukocyte differentiation regulation of leukocyte activation regulation of alpha-beta T cell activation regulation of cell activation mononuclear cell differentiation regulation of cell differentiation lymphocyte differentiation positive regulation of T cell differentiation regulation of cell development positive regulation of developmental process positive regulation of cell activation T cell activation positive regulation of leukocyte activation alpha-beta T cell activation T cell differentiation regulation of immune system process positive regulation of immune system process positive regulation of T cell activation positive regulation of cell development positive regulation of alpha-beta T cell activation regulation of leukocyte cell-cell adhesion positive regulation of multicellular organismal process leukocyte differentiation positive regulation of alpha-beta T cell differentiation regulation of developmental process cell development positive regulation of leukocyte cell-cell adhesion regulation of alpha-beta T cell differentiation lymphocyte activation leukocyte cell-cell adhesion leukocyte activation positive regulation of cell-cell adhesion regulation of T cell differentiation positive regulation of lymphocyte activation alpha-beta T cell differentiation cell-cell adhesion positive regulation of hemopoiesis positive regulation of cell differentiation regulation of multicellular organismal process regulation of cell-cell adhesion regulation of lymphocyte differentiation regulation of multicellular organismal development hemopoiesis positive regulation of cell adhesion regulation of cell adhesion cell activation regulation of T cell activation immune system process regulation of hemopoiesis positive regulation of leukocyte differentiation positive regulation of lymphocyte differentiation regulation of lymphocyte activation alpha-beta T cell lineage commitment T cell lineage commitment cell fate commitment positive regulation of cell communication positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction positive regulation of response to stimulus positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction positive regulation of signaling vascular associated smooth muscle contraction system process positive regulation of smooth muscle contraction regulation of vascular associated smooth muscle contraction regulation of system process circulatory system process smooth muscle contraction regulation of smooth muscle contraction blood vessel diameter maintenance regulation of biological quality blood circulation regulation of tube diameter regulation of tube size positive regulation of vasoconstriction muscle contraction positive regulation of vascular associated smooth muscle contraction muscle system process regulation of muscle system process regulation of blood circulation regulation of muscle contraction positive regulation of muscle contraction vascular process in circulatory system regulation of vasoconstriction vasoconstriction regulation of anatomical structure size skeletal muscle satellite cell migration regulation of systemic arterial blood pressure by endothelin regulation of systemic arterial blood pressure by hormone regulation of systemic arterial blood pressure mediated by a chemical signal regulation of blood pressure regulation of systemic arterial blood pressure endocrine process neuron apoptotic process apoptotic process motor neuron apoptotic process cell death programmed cell death regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process actin cytoskeleton organization regulation of organelle organization organelle organization regulation of actin cytoskeleton organization actin filament-based process cytoskeleton organization bone trabecula morphogenesis trabecula morphogenesis positive regulation of hydrolase activity regulation of hydrolase activity positive regulation of lipase activity polarized epithelial cell differentiation establishment of monopolar cell polarity establishment or maintenance of monopolar cell polarity establishment or maintenance of cell polarity epithelial cell differentiation morphogenesis of a polarized epithelium establishment or maintenance of apical/basal cell polarity establishment or maintenance of bipolar cell polarity epithelium development establishment of epithelial cell apical/basal polarity morphogenesis of an epithelium tissue development establishment of cell polarity tissue morphogenesis establishment or maintenance of epithelial cell apical/basal polarity establishment of apical/basal cell polarity establishment of epithelial cell polarity microtubule cytoskeleton organization microtubule-based process cytoplasmic microtubule organization supramolecular fiber organization substantia nigra development midbrain development neural nucleus development regulation of cell-substrate adhesion negative regulation of cell adhesion negative regulation of cell-substrate adhesion regulation of non-canonical NF-kappaB signal transduction non-canonical NF-kappaB signal transduction positive regulation of non-canonical NF-kappaB signal transduction membraneless organelle assembly mitotic cell cycle cellular component biogenesis cellular component assembly mitotic sister chromatid segregation chromosome segregation microtubule cytoskeleton organization involved in mitosis spindle organization mitotic nuclear division organelle assembly organelle fission chromosome organization sister chromatid segregation spindle assembly mitotic spindle organization mitotic spindle assembly nuclear division mitotic cell cycle process nuclear chromosome segregation cell surface receptor signaling pathway Roundabout signaling pathway regulation of modification of postsynaptic actin cytoskeleton regulation of modification of synaptic structure regulation of synapse organization cell junction organization modification of postsynaptic actin cytoskeleton regulation of synapse structure or activity regulation of modification of postsynaptic structure synapse organization modification of synaptic structure modification of postsynaptic structure regulation of neuron projection development cell projection organization neuron projection development neuron differentiation plasma membrane bounded cell projection organization regulation of cell projection organization neuron development regulation of plasma membrane bounded cell projection organization positive regulation of organelle organization positive regulation of cellular component organization regulation of actin filament bundle assembly positive regulation of actin filament bundle assembly actin filament bundle organization positive regulation of stress fiber assembly stress fiber assembly regulation of actin filament organization actomyosin structure organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization actin filament organization regulation of cellular component biogenesis positive regulation of supramolecular fiber organization regulation of stress fiber assembly contractile actin filament bundle assembly regulation of actomyosin structure organization actin filament bundle assembly regulation of supramolecular fiber organization negative regulation of cell size regulation of cellular component size regulation of cell size positive regulation of leukocyte adhesion to vascular endothelial cell regulation of leukocyte adhesion to vascular endothelial cell leukocyte adhesion to vascular endothelial cell cell-substrate junction assembly cell junction assembly regulation of cell-substrate junction organization focal adhesion assembly regulation of cell junction assembly cell-matrix adhesion regulation of cell-matrix adhesion cell-substrate junction organization regulation of focal adhesion assembly regulation of cell-substrate junction assembly beta selection T cell selection neural precursor cell proliferation regulation of neural precursor cell proliferation apical junction assembly cell-cell junction assembly cell-cell junction organization Wnt signaling pathway, planar cell polarity pathway non-canonical Wnt signaling pathway Wnt signaling pathway regulation of systemic arterial blood pressure by renin-angiotensin positive regulation of systemic arterial blood pressure maintenance of blood vessel diameter homeostasis by renin-angiotensin angiotensin-mediated vasoconstriction involved in regulation of systemic arterial blood pressure positive regulation of blood pressure positive regulation of locomotion regulation of lymphocyte migration positive regulation of cell migration positive regulation of cell motility positive regulation of mononuclear cell migration regulation of mononuclear cell migration positive regulation of lymphocyte migration regulation of leukocyte migration positive regulation of T cell migration lymphocyte migration positive regulation of leukocyte migration leukocyte migration regulation of T cell migration mononuclear cell migration T cell migration positive regulation of podosome assembly positive regulation of protein-containing complex assembly regulation of protein-containing complex assembly regulation of podosome assembly protein-containing complex assembly podosome assembly protein-containing complex organization regulation of organelle assembly positive regulation of organelle assembly endothelium development morphogenesis of an endothelium endothelial tube lumen extension endothelial tube morphogenesis epithelial tube morphogenesis kidney development renal system development apolipoprotein A-I-mediated signaling pathway reactive oxygen species biosynthetic process regulation of biosynthetic process negative regulation of metabolic process reactive oxygen species metabolic process regulation of reactive oxygen species biosynthetic process negative regulation of reactive oxygen species metabolic process biosynthetic process negative regulation of reactive oxygen species biosynthetic process negative regulation of biosynthetic process regulation of reactive oxygen species metabolic process biological process involved in interspecies interaction between organisms response to other organism cellular response to lipopolysaccharide response to oxygen-containing compound cellular response to molecule of bacterial origin response to lipopolysaccharide cellular response to oxygen-containing compound response to biotic stimulus cellular response to biotic stimulus response to bacterium response to external biotic stimulus response to molecule of bacterial origin muscle structure development skeletal muscle organ development skeletal muscle tissue development muscle tissue development muscle organ development striated muscle tissue development aerobic respiration cellular respiration oxidative phosphorylation energy derivation by oxidation of organic compounds negative regulation of cellular respiration regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy regulation of cellular respiration regulation of aerobic respiration regulation of oxidative phosphorylation negative regulation of oxidative phosphorylation regulation of microtubule-based process regulation of microtubule cytoskeleton organization mitotic cytokinetic process mitotic cytokinesis mitotic cleavage furrow formation positive regulation of neuron differentiation regulation of neuron differentiation semaphorin-plexin signaling pathway bone maturation developmental maturation skeletal system development ossification anatomical structure maturation ossification involved in bone maturation animal organ maturation bone development neuron migration RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription wound healing epiboly involved in wound healing morphogenesis of an epithelial sheet response to stress epiboly wound healing, spreading of cells response to wounding negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death regulation of motor neuron apoptotic process negative regulation of apoptotic process negative regulation of motor neuron apoptotic process regulation of neuron apoptotic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol apical junction complex cell-cell junction anchoring junction cell junction neuron spine synapse neuron projection dendritic spine plasma membrane bounded cell projection somatodendritic compartment cellular anatomical structure intracellular anatomical structure cytoplasm cytosol apical junction complex cell-cell junction anchoring junction cell junction neuron spine synapse neuron projection dendritic spine plasma membrane bounded cell projection somatodendritic compartment cell projection postsynapse dendrite dendritic tree midbody focal adhesion cell-substrate junction ruffle cell leading edge plasma membrane membrane leading edge membrane cell periphery ruffle membrane plasma membrane region cell projection membrane cell division site cleavage furrow membrane-bounded organelle organelle subcompartment intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum organelle membrane endoplasmic reticulum membrane intracellular vesicle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle secretory granule secretory vesicle vesicle secretory granule membrane endosome ficolin-1-rich granule membrane ficolin-1-rich granule tertiary granule lamellipodium extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle glutamatergic synapse cytoskeleton membraneless organelle intracellular membraneless organelle cell cortex cytoplasmic side of plasma membrane cytoplasmic side of membrane side of membrane nucleus
B, E	Rho guanine nucleotide exchange factor 25	GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor activity nucleoside-triphosphatase regulator activity molecular function regulator activity	multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development cellular component organization or biogenesis system development developmental process plasma membrane bounded cell projection organization axon guidance nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron projection guidance neuron development cellular process cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process small GTPase-mediated signal transduction response to stimulus signaling regulation of small GTPase mediated signal transduction biological regulation regulation of signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus intracellular signaling cassette regulation of cell communication signal transduction	intracellular anatomical structure intracellular membraneless organelle sarcomere intracellular organelle cellular anatomical structure organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex cytosol intracellular anatomical structure intracellular membraneless organelle sarcomere intracellular organelle cellular anatomical structure organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex cytosol cell periphery plasma membrane membrane extrinsic component of membrane
A, D	Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(q) subunit alpha	D2 dopamine receptor binding protein binding binding signaling receptor binding G protein-coupled receptor binding dopamine receptor binding enzyme regulator activity adenylate cyclase inhibitor activity cyclase regulator activity molecular function inhibitor activity cyclase inhibitor activity molecular function regulator activity enzyme inhibitor activity adenylate cyclase regulator activity D2 dopamine receptor binding protein binding binding signaling receptor binding G protein-coupled receptor binding dopamine receptor binding enzyme regulator activity adenylate cyclase inhibitor activity cyclase regulator activity molecular function inhibitor activity cyclase inhibitor activity molecular function regulator activity enzyme inhibitor activity adenylate cyclase regulator activity GTPase activating protein binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding magnesium ion binding metal ion binding GDP binding G protein-coupled serotonin receptor binding protein-containing complex binding G-protein beta/gamma-subunit complex binding pyrophosphatase activity GTPase activity G protein activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity GTPase regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity phosphoric ester hydrolase activity alkylglycerophosphoethanolamine phosphodiesterase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity	protein localization to postsynaptic specialization membrane protein localization to postsynaptic membrane protein localization to cell periphery cellular localization protein localization to synapse biological regulation localization within membrane protein localization to membrane protein-containing complex localization neurotransmitter receptor localization to postsynaptic specialization membrane localization regulation of postsynaptic membrane neurotransmitter receptor levels macromolecule localization protein localization to organelle protein localization to postsynaptic specialization membrane protein localization to postsynaptic membrane protein localization to cell periphery cellular localization protein localization to synapse biological regulation localization within membrane protein localization to membrane protein-containing complex localization neurotransmitter receptor localization to postsynaptic specialization membrane localization regulation of postsynaptic membrane neurotransmitter receptor levels macromolecule localization protein localization to organelle cellular process protein localization to postsynapse intracellular protein localization regulation of biological quality protein localization to cell junction receptor localization to synapse cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling adenylate cyclase-inhibiting serotonin receptor signaling pathway G protein-coupled serotonin receptor signaling pathway cell communication adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway adenylate cyclase-modulating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway signal transduction cell division leukocyte migration immune system process mononuclear cell migration lymphocyte migration cell migration T cell migration cell motility regulation of steroid biosynthetic process regulation of cholesterol biosynthetic process regulation of cholesterol metabolic process steroid metabolic process regulation of lipid metabolic process sterol metabolic process positive regulation of biological process cholesterol metabolic process lipid biosynthetic process alcohol metabolic process regulation of primary metabolic process positive regulation of metabolic process regulation of small molecule metabolic process positive regulation of biosynthetic process positive regulation of lipid metabolic process small molecule metabolic process steroid biosynthetic process positive regulation of cellular process regulation of biosynthetic process secondary alcohol biosynthetic process regulation of alcohol biosynthetic process small molecule biosynthetic process regulation of steroid metabolic process cholesterol biosynthetic process positive regulation of cholesterol biosynthetic process primary metabolic process secondary alcohol metabolic process positive regulation of steroid biosynthetic process biosynthetic process sterol biosynthetic process positive regulation of lipid biosynthetic process regulation of sterol biosynthetic process alcohol biosynthetic process positive regulation of cholesterol metabolic process positive regulation of steroid metabolic process metabolic process regulation of lipid biosynthetic process positive regulation of small molecule metabolic process regulation of metabolic process positive regulation of alcohol biosynthetic process positive regulation of sterol biosynthetic process lipid metabolic process cell surface receptor signaling pathway response to cytokine response to chemokine cytokine-mediated signaling pathway cellular response to chemokine chemokine-mediated signaling pathway response to peptide response to chemical cellular response to cytokine stimulus negative regulation of protein transport regulation of localization establishment of protein localization nitrogen compound transport negative regulation of biological process negative regulation of transport negative regulation of secretion negative regulation of hormone secretion negative regulation of secretion by cell regulation of peptide hormone secretion negative regulation of peptide hormone secretion regulation of hormone levels establishment of protein localization to extracellular region negative regulation of establishment of protein localization protein secretion establishment of localization regulation of protein secretion regulation of secretion negative regulation of protein secretion regulation of hormone secretion regulation of protein localization regulation of peptide secretion transport negative regulation of signaling hormone secretion negative regulation of cell communication protein localization to extracellular region negative regulation of peptide secretion peptide secretion regulation of secretion by cell secretion by cell signal release negative regulation of cellular process negative regulation of protein localization regulation of signaling regulation of transport secretion regulation of peptide transport regulation of establishment of protein localization export from cell cell-cell signaling regulation of protein transport peptide transport negative regulation of insulin secretion protein transport regulation of insulin secretion peptide hormone secretion hormone transport regulation of cell communication insulin secretion regulation of cytoskeleton organization regulation of cellular component organization microtubule cytoskeleton organization regulation of mitotic spindle organization mitotic cell cycle cellular component organization cell cycle cellular component organization or biogenesis regulation of cell cycle microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process regulation of cell cycle process regulation of microtubule-based process regulation of spindle organization regulation of organelle organization mitotic spindle organization organelle organization mitotic cell cycle process microtubule-based process cytoskeleton organization regulation of microtubule cytoskeleton organization positive regulation of protein localization to cell periphery positive regulation of protein localization to cell cortex regulation of protein localization to cell periphery regulation of protein localization to cell cortex positive regulation of protein localization protein localization to cell cortex response to ketone response to prostaglandin response to lipid response to hormone response to endogenous stimulus response to alcohol response to prostaglandin E response to oxygen-containing compound trans-synaptic signaling modulation of chemical synaptic transmission negative regulation of synaptic transmission chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling cellular response to forskolin cellular response to oxygen-containing compound cellular response to chemical stimulus cellular response to alcohol response to forskolin cellular response to lipid cellular response to ketone regulation of Wnt signaling pathway regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway regulation of signal transduction regulation of response to stimulus Wnt signaling pathway developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development system process circulatory system process regulation of blood pressure blood circulation regulation of protein stability protein stabilization phospholipase C-activating serotonin receptor signaling pathway phospholipase C-activating G protein-coupled receptor signaling pathway cellular developmental process cell development developmental maturation nervous system development generation of neurons neurogenesis neuron differentiation neuron remodeling anatomical structure maturation cell differentiation neuron development neuron maturation cell maturation skeletal system development glutamate receptor signaling pathway pigmentation developmental pigmentation adenylate cyclase-activating G protein-coupled receptor signaling pathway adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway regulation of body fluid levels wound healing cell activation hemostasis regulation of cell activation blood coagulation regulation of platelet activation response to stress coagulation regulation of multicellular organismal process response to wounding platelet activation forebrain development central nervous system neuron development central nervous system neuron differentiation head development forebrain generation of neurons brain development forebrain neuron development central nervous system development forebrain neuron differentiation phospholipase C-activating dopamine receptor signaling pathway cellular response to nitrogen compound response to dopamine cellular response to dopamine response to monoamine response to catecholamine cellular response to catecholamine stimulus G protein-coupled dopamine receptor signaling pathway response to nitrogen compound cellular response to monoamine stimulus neuropeptide signaling pathway negative regulation of potassium ion transport regulation of potassium ion transport negative regulation of monoatomic ion transport regulation of monoatomic ion transport metal ion transport monoatomic ion transport potassium ion transport monoatomic cation transport regulation of metal ion transport phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway cellular response to acetylcholine acetylcholine receptor signaling pathway postsynaptic signal transduction G protein-coupled acetylcholine receptor signaling pathway response to acetylcholine cranial skeletal system development negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death action potential regulation of membrane potential hormone-mediated signaling pathway cellular response to endogenous stimulus cellular response to hormone stimulus maternal behavior behavior parental behavior reproductive process multicellular organismal reproductive process reproductive behavior response to pH cellular response to pH response to abiotic stimulus cellular response to acidic pH response to acidic pH cellular response to abiotic stimulus cellular response to environmental stimulus pigment cell differentiation regulation of developmental process regulation of pigment cell differentiation regulation of cell differentiation melanocyte differentiation regulation of melanocyte differentiation endothelin receptor signaling pathway phospholipase C-activating G protein-coupled glutamate receptor signaling pathway G protein-coupled glutamate receptor signaling pathway positive regulation of cell communication positive regulation of establishment of protein localization positive regulation of insulin secretion positive regulation of peptide hormone secretion positive regulation of secretion by cell positive regulation of protein transport positive regulation of hormone secretion positive regulation of secretion positive regulation of peptide secretion positive regulation of protein secretion positive regulation of transport positive regulation of signaling post-embryonic development ligand-gated ion channel signaling pathway limb development appendage development embryonic limb morphogenesis embryonic morphogenesis embryonic appendage morphogenesis embryo development anatomical structure morphogenesis appendage morphogenesis embryonic digit morphogenesis limb morphogenesis	midbody cellular anatomical structure membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle membraneless organelle midbody cellular anatomical structure membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle membraneless organelle nuclear lumen cell periphery cell cortex cytoplasm protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cytoplasmic side of plasma membrane GTPase complex extrinsic component of membrane extrinsic component of cytoplasmic side of plasma membrane centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton centriolar satellite cytosol nucleoplasm synapse cell junction glutamatergic synapse Golgi apparatus endomembrane system postsynapse cilium plasma membrane bounded cell projection ciliary basal body cell projection nuclear membrane organelle envelope nuclear envelope organelle membrane somatodendritic compartment dendrite dendritic tree neuron projection cell body membrane microdomain membrane raft plasma membrane raft plasma membrane region caveola presynapse postsynaptic cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, F	IPR001806	Small GTPase	Family
C, F	IPR003578	Small GTPase Rho	Family
C, F	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
C, F	IPR005225	Small GTP-binding domain	Domain
B, E	IPR051336	Rho GTPase-activating Guanine Nucleotide Exchange Factors	Family
B, E	IPR001849	Pleckstrin homology domain	Domain
B, E	IPR000219	Dbl homology domain	Domain
B, E	IPR035899	Dbl homology (DH) domain superfamily	Homologous Superfamily
B, E	IPR011993	PH-like domain superfamily	Homologous Superfamily
B, E	IPR055251	SOS1/NGEF-like, PH domain	Domain
A, D	IPR001019	Guanine nucleotide binding protein, alpha subunit	Family
A, D	IPR011025	G protein alpha subunit, helical insertion	Homologous Superfamily
A, D	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, D	IPR001408	G-protein alpha subunit, group I	Family
A, D	IPR001019	Guanine nucleotide binding protein, alpha subunit	Family
A, D	IPR000654	G-protein alpha subunit, group Q	Family
A, D	IPR011025	G protein alpha subunit, helical insertion	Homologous Superfamily
A, D	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C, F	Pharos: P61586	mature T-cell and NK-cell non-Hodgkin lymphoma carcinoma primary cutaneous T-cell non-Hodgkin lymphoma sarcomatoid carcinoma proteinuria T-cell non-Hodgkin lymphoma urinary bladder cancer angioimmunoblastic T-cell lymphoma Neoplasm Invasiveness cancer heart disease IgA glomerulonephritis breast disease osteoporosis pancreatic ductal adenocarcinoma mature T-cell and NK-cell non-Hodgkin lymphoma carcinoma primary cutaneous T-cell non-Hodgkin lymphoma sarcomatoid carcinoma proteinuria T-cell non-Hodgkin lymphoma urinary bladder cancer angioimmunoblastic T-cell lymphoma Neoplasm Invasiveness cancer heart disease IgA glomerulonephritis breast disease osteoporosis pancreatic ductal adenocarcinoma exocrine pancreatic carcinoma undifferentiated carcinoma gastrointestinal stromal tumor hereditary diffuse gastric adenocarcinoma lung carcinoma lymphoplasmacytic lymphoma malignant pancreatic neoplasm myopathy Burkitt lymphoma osteosarcoma endogenous depression gastric cancer granulomatous slack skin disease lymphoma malignant ependymoma MALT lymphoma ovarian cancer congenital diaphragmatic hernia plasma cell myeloma diabetes mellitus rheumatoid arthritis endometriosis toxic or drug-related embryofetopathy gastric neoplasm urinary bladder neoplasm
B, E	Pharos: Q86VW2	atypical teratoid rhabdoid tumor malignant ependymoma primitive neuroectodermal tumor glioblastoma malignant glioma large cell medulloblastoma medulloblastoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.