2W2R | pdb_00002w2r

Structure of the vesicular stomatitis virus matrix protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2w2ra_	Alpha and beta proteins (a+b)	VSV matrix protein	VSV matrix protein	automated matches	automated matches	(Vesicular stomatitis virus ) [TaxId: 11276 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	VSV matrix protein	8087131	4002585	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	VSV matrix protein	8087132	3001449	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Protoglobin	e2w2rA1	A: alpha bundles	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Protoglobin	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.460.10	Alpha Beta	Roll	VSV matrix protein	VSV matrix protein	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	MATRIX PROTEIN	structural constituent of virion structural molecule activity	virion assembly viral process viral budding viral budding via host ESCRT complex viral life cycle symbiont-mediated perturbation of host intracellular transport symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host mRNA export from nucleus biological process involved in interspecies interaction between organisms symbiont-mediated suppression of host gene expression symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host virion assembly viral process viral budding viral budding via host ESCRT complex viral life cycle symbiont-mediated perturbation of host intracellular transport symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host mRNA export from nucleus biological process involved in interspecies interaction between organisms symbiont-mediated suppression of host gene expression symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nuclear membrane host cell membrane host cell nucleus other organism part host cell nuclear part host intracellular organelle cellular anatomical structure host cell part host cell endomembrane system host intracellular region host cell nuclear envelope host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nuclear membrane host cell membrane host cell nucleus other organism part host cell nuclear part host intracellular organelle cellular anatomical structure host cell part host cell endomembrane system host intracellular region host cell nuclear envelope virion component viral membrane viral envelope host cell cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR009397	Vesiculovirus matrix	Family
A	IPR036711	VSV matrix superfamily	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM	Monotopic/peripheral	Alpha + Beta monotopic/peripheral	Vesiculovirus matrix protein	Vesiculovirus matrix protein

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.