2WHS | pdb_00002whs

Fluorescent Protein mKeima at pH 3.8

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2whsd1	Alpha and beta proteins (a+b)	GFP-like	GFP-like	Fluorescent proteins	automated matches	(Montipora sp. 20 ) [TaxId: 321802 ],	SCOPe (2.08)
D	d2whsd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Montipora sp. 20 ) [TaxId: 321802 ],	SCOPe (2.08)
C	d2whsc_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	Fluorescent proteins	automated matches	(Montipora sp. 20 ) [TaxId: 321802 ],	SCOPe (2.08)
B	d2whsb1	Alpha and beta proteins (a+b)	GFP-like	GFP-like	Fluorescent proteins	automated matches	(Montipora sp. 20 ) [TaxId: 321802 ],	SCOPe (2.08)
B	d2whsb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Montipora sp. 20 ) [TaxId: 321802 ],	SCOPe (2.08)
A	d2whsa_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	Fluorescent proteins	automated matches	(Montipora sp. 20 ) [TaxId: 321802 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	GFP-like	8083468	3000576	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GFP-like	8083468	3000576	SCOP2B (2022-06-29)
B	SCOP2 Family	Fluorescent proteins	8083467	4001049	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	GFP-like	8083468	3000576	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	GFP-like	8083468	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Ribosomal_L36	e2whsD1	A: alpha bundles	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (develop294)
C	Ribosomal_L36	e2whsC1	A: alpha bundles	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (develop294)
B	Ribosomal_L36	e2whsB1	A: alpha bundles	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (develop294)
A	PDZ_6	e2whsA1	A: alpha bundles	X: Alpha-beta plaits	H: HMA-related	T: HMA, heavy metal-associated domain	F: PDZ_6	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
C	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
B	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
A	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	LARGE STOKES SHIFT FLUORESCENT PROTEIN	-	bioluminescence metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR011584	Green fluorescent protein-related	Family
A, B, C, D	IPR009017	Green fluorescent protein	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D	CRQ	Parent Component: GLN, TYR, GLY RESID: AA0189 PSI-MOD : 2-imino-glutamine 5-imidazolinone glycine MOD:00197

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.