Truncated SipD from Salmonella typhimurium
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2ym0a1 | All alpha proteins | IpaD-like | IpaD-like | automated matches | automated matches | (Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 ) [TaxId: 216597 ], | SCOPe (2.08) |
| A | d2ym0a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 ) [TaxId: 216597 ], | SCOPe (2.08) |
| B | d2ym0b1 | All alpha proteins | IpaD-like | IpaD-like | automated matches | automated matches | (Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 ) [TaxId: 216597 ], | SCOPe (2.08) |
| B | d2ym0b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 ) [TaxId: 216597 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | FeoB_Cyto | e2ym0A1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: FeoB_Cyto | ECOD (v294.1) |
| B | e2ym0B2 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.1710.10 | Mainly Alpha | Up-down Bundle | IpaD-like | IpaD-like | CATH (4.3.0) |
| B | 1.20.1710.10 | Mainly Alpha | Up-down Bundle | IpaD-like | IpaD-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF06511 | Type III secretion systems tip complex components (T3SS_TC) | Type III secretion systems tip complex components | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| CELL INVASION PROTEIN SIPD | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009483 | Type III secretion systems tip complex component IpaD/BipD/SipD | Family | |
| IPR036708 | BipD-like superfamily | Homologous Superfamily |
