3BQL | pdb_00003bql

Structure of a chondroitin sulphate binding DBL3X domain from a var2csa encoded PfEMP1 protein

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASpectrine3bqlA1 A: alpha bundlesX: Spectrin repeat-likeH: Spectrin repeatT: Spectrin repeatF: SpectrinECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1310.20 Mainly Alpha Up-down Bundle 5 helical Cullin repeat like Duffy-antigen binding domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Erythrocyte membrane protein 1 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR008602Duffy-antigen binding domainDomain
IPR044932Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segment superfamilyHomologous Superfamily
IPR042202Duffy-antigen binding superfamilyHomologous Superfamily
IPR032761Plasmodium falciparum erythrocyte membrane protein 1, N-terminalDomain
IPR029211Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segmentDomain