3C4R | pdb_00003c4r

Crystal structure of an uncharacterized protein encoded by cryptic prophage

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B Superfamilylambda C1 repressor DNA-binding domain-like 8106399 3000119 SCOP2B (2022-06-29)
CSCOP2 FamilyPutative bacterial toxin YdaT-like 8047977 4005892 SCOP2 (2022-06-29)
CSCOP2 Superfamilylambda C1 repressor DNA-binding domain-like 8106399 3000119 SCOP2 (2022-06-29)
BSCOP2B Superfamilylambda C1 repressor DNA-binding domain-like 8106399 3000119 SCOP2B (2022-06-29)
ASCOP2B Superfamilylambda C1 repressor DNA-binding domain-like 8106399 3000119 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DDUF3239e3c4rD1 A: alpha bundlesX: HTHH: NudixT: NudixF: DUF3239ECOD (develop294)
CDUF3239e3c4rC1 A: alpha bundlesX: HTHH: NudixT: NudixF: DUF3239ECOD (develop294)
BDUF3239e3c4rB1 A: alpha bundlesX: HTHH: NudixT: NudixF: DUF3239ECOD (develop294)
AYdaT_toxine3c4rA1 A: alpha bundlesX: Uncharacterized protein encoded by cryptic prophageH: Uncharacterized protein encoded by cryptic prophageT: Uncharacterized protein encoded by cryptic prophageF: YdaT_toxinECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D1.10.3600.10 Mainly Alpha Orthogonal Bundle uncharacterized protein encoded by cryptic prophage fold Putative bacterial toxin ydaTCATH (4.3.0)
C1.10.3600.10 Mainly Alpha Orthogonal Bundle uncharacterized protein encoded by cryptic prophage fold Putative bacterial toxin ydaTCATH (4.3.0)
B1.10.3600.10 Mainly Alpha Orthogonal Bundle uncharacterized protein encoded by cryptic prophage fold Putative bacterial toxin ydaTCATH (4.3.0)
A1.10.3600.10 Mainly Alpha Orthogonal Bundle uncharacterized protein encoded by cryptic prophage fold Putative bacterial toxin ydaTCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF06254Bacterial toxin ydaT (YdaT_toxin)Bacterial toxin ydaT- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR037042Transcriptional regulator YdaT-like superfamilyHomologous Superfamily
A, B, C, D
IPR009364YdaT-likeFamily