3C8T | pdb_00003c8t

Crystal structure of fumarate lyase from Mesorhizobium sp. BNC1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3c8ta_	All alpha proteins	L-aspartase-like	L-aspartase-like	automated matches	automated matches	(Chelativorans sp. BNC1 ) [TaxId: 266779 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	L-aspartase/fumarase	8076922	4001433	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	L-aspartase-like	8076923	3001572	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e3c8tA2	A: Alpha-beta plaits	X: HD-domain/PDEase-like	H: HD-domain/PDEase-like	T: NUDIX	F:	ECOD (20:10:01)
A		e3c8tA1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: Cellulase	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.275.10	Mainly Alpha	Orthogonal Bundle	Fumarase C	Chain B, domain 1	CATH (4.3.0)
A	1.20.200.10	Mainly Alpha	Up-down Bundle	Fumarase C	Chain A, domain 2	CATH (4.3.0)
A	1.10.40.30	Mainly Alpha	Orthogonal Bundle	Ribonucleotide Reductase Protein R1	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Fumarate lyase	lyase activity catalytic activity intramolecular lyase activity isomerase activity 3-carboxy-cis,cis-muconate cycloisomerase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR000362	Fumarate lyase family	Family
A	IPR022761	Fumarate lyase, N-terminal	Domain
A	IPR024083	Fumarase/histidase, N-terminal	Homologous Superfamily
A	IPR008948	L-Aspartase-like	Homologous Superfamily
A	IPR019468	Adenylosuccinate lyase C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.