Crystal structure of cagd from helicobacter pylori pathogenicity island
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | CagD-like | 8092205 | 3002571 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | CagD-like | 8092205 | 3002571 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | CagD-like | 8045791 | 4004688 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | CagD-like | 8092205 | 3002571 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | WW | e3cwxC1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: WW | ECOD (v295.2) |
| B | WW | e3cwxB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: WW | ECOD (v295.2) |
| A | CagD | e3cwxA1 | A: alpha arrays | X: Alpha-beta plaits | H: Ribosomal protein L10-like | T: Ribosomal protein L10-like | F: CagD | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.1420.20 | Alpha Beta | 3-Layer(aba) Sandwich | Inhibitor of vertebrate lysozyme, Ivy | Pathogenicity island component CagD | CATH (4.3.0) |
| B | 3.40.1420.20 | Alpha Beta | 3-Layer(aba) Sandwich | Inhibitor of vertebrate lysozyme, Ivy | Pathogenicity island component CagD | CATH (4.3.0) |
| A | 3.40.1420.20 | Alpha Beta | 3-Layer(aba) Sandwich | Inhibitor of vertebrate lysozyme, Ivy | Pathogenicity island component CagD | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR032336 | Pathogenicity island component CagD | Family | |
| IPR038229 | Pathogenicity island component CagD superfamily | Homologous Superfamily |














