3HZB | pdb_00003hzb

Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d3hzbh_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)
G	d3hzbg_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)
F	d3hzbf_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)
E	d3hzbe_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)
D	d3hzbd_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)
C	d3hzbc_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)
B	d3hzbb_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)
A	d3hzba_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Cytophaga johnsonae (Flavobacterium johnsoniae UW101 ) [TaxId: 376686 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2B (2022-06-29)
A	SCOP2 Family	Crystallins/Ca-binding development proteins	8071341	4002359	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	gamma-Crystallin-like	8071342	3001138	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	adh_short	e3hzbH1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
G	adh_short	e3hzbG1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
F	adh_short	e3hzbF1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
E	adh_short	e3hzbE1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
D	adh_short	e3hzbD1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
C	adh_short	e3hzbC1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
B	adh_short	e3hzbB1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
A	Ribonuclease	e3hzbA1	A: alpha bundles	X: Cystatin-like	H: NTF2-like	T: NTF2-like	F: Ribonuclease	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
G	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
F	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
E	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
D	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
C	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
B	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
A	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Carbohydrate binding protein	binding carbohydrate binding cation binding ion binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001064	Beta/gamma crystallin	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR005084	Carbohydrate binding module family 6	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011024	Gamma-crystallin-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR006584	Cellulose binding, type IV	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR035992	Ricin B-like lectins	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR026444	Secretion system, C-terminal sorting domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000772	Ricin B, lectin domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.