Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | SNase | e3j2yA1 | A: alpha bundles | X: LidA | H: LidA | T: LidA | F: SNase | ECOD (develop294) |
| B [auth C] | HSP70 | e3j2yC1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: HSP70 | ECOD (develop294) |
| C [auth E] | HSP70 | e3j2yE1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: HSP70 | ECOD (develop294) |
| D [auth G] | HSP70 | e3j2yG1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: HSP70 | ECOD (develop294) |
| E [auth B] | SNase | e3j2yB1 | A: alpha bundles | X: Long alpha-hairpin | H: C-terminal UvrC-binding domain of UvrB | T: C-terminal UvrC-binding domain of UvrB | F: SNase | ECOD (develop294) |
| F [auth D] | HSP70 | e3j2yD1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: HSP70 | ECOD (develop294) |
| G [auth F] | HSP70 | e3j2yF1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: HSP70 | ECOD (develop294) |
| H | HSP70 | e3j2yH1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: HSP70 | ECOD (develop294) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| A, B [auth C], C [auth E], D [auth G] | 9.8B | L-KAPPA | Mus musculus (house mouse) | IGKV4-55*01, IGKJ5*01, IGKC*01, IGKC*02 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-2C_KAPPA | IMGT (202610-0) |
| E [auth B], F [auth D], G [auth F], H | 9.8B | VH-CH1 | Mus musculus (house mouse) | IGHV1-52*01, IGHJ1*03, IGHG2C*01, IGHG2C*02, IGHG2C*03 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-2C_KAPPA | IMGT (202610-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| A, B [auth C], C [auth E], D [auth G] | Light Chain | IGKV4 | Kappa | - | SAbDab (2026-03-20) |
| E [auth B], F [auth D], G [auth F], H | Heavy Chain | IGHV1 | - | - | SAbDab (2026-03-20) |
