3JAI | pdb_00003jai

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ISCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
IC [auth jj]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8089861 3002020 SCOP2B (2022-06-29)
IC [auth jj]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8089860 3002020 SCOP2B (2022-06-29)
IC [auth jj]SCOP2B Superfamily4Fe-4S ferredoxins 8089857 3000020 SCOP2B (2022-06-29)
HC [auth ii]SCOP2B SuperfamilyTranslational machinery components 8044552 3000571 SCOP2B (2022-06-29)
HC [auth ii]SCOP2B SuperfamilyL30e-like 8036030 3001739 SCOP2B (2022-06-29)
HC [auth ii]SCOP2B SuperfamilyN-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 8035419 3001963 SCOP2B (2022-06-29)
DC [auth ee]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)
CC [auth dd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052584 3000068 SCOP2B (2022-06-29)
BC [auth cc]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
YB [auth ZZ]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
VB [auth WW]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
UB [auth VV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053140 3000068 SCOP2B (2022-06-29)
TB [auth UU]SCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
SB [auth TT]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089322 3000034 SCOP2B (2022-06-29)
RB [auth SS]SCOP2 FamilyRibosomal protein S13 8101436 4000260 SCOP2 (2022-06-29)
RB [auth SS]SCOP2 SuperfamilyS13-like H2TH domain 8101437 3000053 SCOP2 (2022-06-29)
RB [auth SS]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
PB [auth QQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082683 3000100 SCOP2B (2022-06-29)
NB [auth OO]SCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
MB [auth NN]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
MB [auth NN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
LB [auth MM]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
KB [auth LL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
KB [auth LL]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
JB [auth KK]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055720 3000034 SCOP2B (2022-06-29)
HB [auth II]SCOP2B Superfamily50S Ribosomal protein L14-like 8053075 3000433 SCOP2B (2022-06-29)
EB [auth FF]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
DB [auth EE]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052745 3001473 SCOP2B (2022-06-29)
DB [auth EE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052747 3000334 SCOP2B (2022-06-29)
DB [auth EE]SCOP2B SuperfamilyNucleic acid-binding proteins 8052746 3000135 SCOP2B (2022-06-29)
AB [auth BB]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
ESCOP2 FamilyRibosomal protein L6e, N-terminal domain 8045043 4004275 SCOP2 (2022-06-29)
ESCOP2 FamilyRibosomal protein L6e 8048639 4006169 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyRibosomal protein L6e, N-terminal domain 8053101 3002160 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053102 3000334 SCOP2 (2022-06-29)
OA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
DSCOP2 FamilyRibosomal protein L5e and archael L18-like 8049687 4006591 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyTranslational machinery components 8052886 3000571 SCOP2 (2022-06-29)
KA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8095595 3001756 SCOP2B (2022-06-29)
HA [auth i]SCOP2 FamilyRibosomal protein L36e 8048627 4006168 SCOP2 (2022-06-29)
HA [auth i]SCOP2 SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2 (2022-06-29)
FA [auth g]SCOP2 FamilyRibosomal protein L34e-like 8048728 4006193 SCOP2 (2022-06-29)
FA [auth g]SCOP2 SuperfamilyRibosomal protein L34e-like 8053543 3002203 SCOP2 (2022-06-29)
FA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
EA [auth f]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
DA [auth e]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
CSCOP2 Family60S ribosomal protein L4 C-terminal domain-like 8049946 4006700 SCOP2 (2022-06-29)
CSCOP2 FamilyRibosomal protein L4 8052827 4003628 SCOP2 (2022-06-29)
CSCOP2 Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2 (2022-06-29)
AA [auth b]SCOP2 FamilyRibosomal protein L29e 8049527 4006531 SCOP2 (2022-06-29)
AA [auth b]SCOP2 SuperfamilyRibosomal protein L29e 8053037 3002157 SCOP2 (2022-06-29)
Z [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
Y [auth Z]SCOP2 FamilyRibosomal protein L27e 8049501 4006529 SCOP2 (2022-06-29)
Y [auth Z]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2 (2022-06-29)
X [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
W [auth X]SCOP2 FamilyL23p 8045183 4000943 SCOP2 (2022-06-29)
W [auth X]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2 (2022-06-29)
U [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ie3jaiI1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
IC [auth jj]e3jaijj1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
HC [auth ii]e3jaiii1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
FC [auth gg]e3jaigg1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
EC [auth ff]e3jaiff1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
DC [auth ee]e3jaiee1 A: Type II ABC importer transmembrane domain foldX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: MitMem_regF:ECOD (20:10:01)
CC [auth dd]e3jaidd1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
BC [auth cc]e3jaicc1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
He3jaiH1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
AC [auth bb]e3jaibb1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
ZB [auth aa]e3jaiaa1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
YB [auth ZZ]e3jaiZZ1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
XB [auth YY]e3jaiYY1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
WB [auth XX]e3jaiXX1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
VB [auth WW]e3jaiWW1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
UB [auth VV]e3jaiVV1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
TB [auth UU]e3jaiUU1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
SB [auth TT]e3jaiTT1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
RB [auth SS]e3jaiSS1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
Ge3jaiG1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
QB [auth RR]e3jaiRR1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
PB [auth QQ]e3jaiQQ1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
OB [auth PP]e3jaiPP1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
NB [auth OO]e3jaiOO1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
MB [auth NN]e3jaiNN1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
LB [auth MM]e3jaiMM1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
KB [auth LL]e3jaiLL1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
JB [auth KK]e3jaiKK1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
IB [auth JJ]e3jaiJJ1 A: Type II ABC importer transmembrane domain foldX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: MitMem_regF:ECOD (20:10:01)
HB [auth II]e3jaiII1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
Fe3jaiF1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
GB [auth HH]e3jaiHH1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
FB [auth GG]e3jaiGG1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
EB [auth FF]e3jaiFF1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
DB [auth EE]e3jaiEE1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
CB [auth DD]e3jaiDD1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
BB [auth CC]e3jaiCC1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
BB [auth CC]e3jaiCC2 A: TIM beta/alpha-barrelX: TIM barrelsH: TIM barrelsT: Ribosomal_L2_CF:ECOD (20:10:01)
AB [auth BB]e3jaiBB1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
ZA [auth AA]e3jaiAA1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
Ee3jaiE1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
RA [auth t]e3jait1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
QA [auth s]e3jais1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
QA [auth s]e3jais2 A: Type II ABC importer transmembrane domain foldX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: MitMem_regF:ECOD (20:10:01)
PA [auth r]e3jair1 A: Alpha-beta plaitsX: Pseudouridine synthaseH: Pseudouridine synthaseT: MG1F:ECOD (20:10:01)
OA [auth p]e3jaip1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
NA [auth o]e3jaio1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
De3jaiD1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
MA [auth n]e3jain1 A: Cytidine deaminase-likeX: Ribonuclease H-likeH: Ribonuclease H-likeT: PCIF:ECOD (20:10:01)
LA [auth m]e3jaim1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
KA [auth l]e3jail1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
JA [auth k]e3jaik1 A: Alpha-beta plaitsX: Pseudouridine synthaseH: Pseudouridine synthaseT: MG2F:ECOD (20:10:01)
IA [auth j]e3jaij1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
HA [auth i]e3jaii1 A: Type II ABC importer transmembrane domain foldX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: MitMem_regF:ECOD (20:10:01)
GA [auth h]e3jaih1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
FA [auth g]e3jaig1 A: Alpha-beta plaitsX: Pseudouridine synthaseH: Pseudouridine synthaseT: MG2F:ECOD (20:10:01)
EA [auth f]e3jaif1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
DA [auth e]e3jaie1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
Ce3jaiC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: Ribos_L4_asso_CF:ECOD (20:10:01)
CA [auth d]e3jaid1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
BA [auth c]e3jaic1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
AA [auth b]e3jaib1 A: Alpha-beta plaitsX: Pseudouridine synthaseH: Pseudouridine synthaseT: MG2F:ECOD (20:10:01)
Z [auth a]e3jaia1 A: P-loop domains-likeX: Cas7-relatedH: CRISPR-associated protein Cas7f/Csy3T: WD40, Beta-prop_NOL10_NF:ECOD (20:10:01)
Y [auth Z]e3jaiZ1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
X [auth Y]e3jaiY1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
W [auth X]e3jaiX1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
V [auth W]e3jaiW1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
U [auth V]e3jaiV1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
T [auth U]e3jaiU1 A: Type II ABC importer transmembrane domain foldX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: MitMem_regF:ECOD (20:10:01)
Be3jaiB1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
S [auth T]e3jaiT1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
R [auth S]e3jaiS1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
Q [auth R]e3jaiR1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
P [auth Q]e3jaiQ1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
O [auth P]e3jaiP1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
N [auth O]e3jaiO1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
M [auth N]e3jaiN1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
L [auth M]e3jaiM1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
K [auth L]e3jaiL1 A: Alpha-beta plaitsX: Pseudouridine synthaseH: Pseudouridine synthaseT: MG2F:ECOD (20:10:01)
Je3jaiJ1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)
Ae3jaiA1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: BONF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
YB [auth ZZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
XB [auth YY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
WB [auth XX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
VB [auth WW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
UB [auth VV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
TB [auth UU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
SB [auth TT]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
RB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
QB [auth RR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
PB [auth QQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
OB [auth PP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
NB [auth OO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
MB [auth NN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
MB [auth NN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
LB [auth MM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
KB [auth LL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
KB [auth LL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
JB [auth KK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
IB [auth JJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
IB [auth JJ]PF04068Possible Fer4-like domain in RNase L inhibitor, RLI (Fer4_RLI)Possible Fer4-like domain in RNase L inhibitor, RLI- Family
IB [auth JJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
IB [auth JJ]PF000374Fe-4S binding domain (Fer4)4Fe-4S binding domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain
IB [auth JJ]PF00005ABC transporter (ABC_tran)ABC transporterABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains.
Domain
HB [auth II]PF03463eRF1 domain 1 (eRF1_1)eRF1 domain 1The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
HB [auth II]PF03464eRF1 domain 2 (eRF1_2)eRF1 domain 2The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
HB [auth II]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
GB [auth HH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
FB [auth GG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
FB [auth GG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
EB [auth FF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
EB [auth FF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
DB [auth EE]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
DB [auth EE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
DB [auth EE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
DB [auth EE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
DB [auth EE]PF00467KOW motif (KOW)KOW motif- Family
CB [auth DD]PF07650KH domain (KH_2)KH domainDomain
CB [auth DD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
CB [auth DD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
AB [auth BB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
AB [auth BB]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domainDomain
PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
Y [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
Y [auth Z]PF00467KOW motif (KOW)KOW motif- Family
X [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
X [auth Y]PF00467KOW motif (KOW)KOW motif- Family
W [auth X]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
W [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
S [auth T]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
S [auth T]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
S [auth T]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
Q [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
O [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
N [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
M [auth N]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
M [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
L [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
K [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
uL16
IC [auth jj]ABCE1
HC [auth ii]eRF1
GC [auth hh]mRNA---
FC [auth gg]RACK1
EC [auth ff]eS31
DC [auth ee]eS30
CC [auth dd]uS14
BC [auth cc]eS28
uL6
AC [auth bb]eS27
ZB [auth aa]eS26---
YB [auth ZZ]eS25
XB [auth YY]eS24
WB [auth XX]uS12
VB [auth WW]uS8
UB [auth VV]eS21
TB [auth UU]uS10
SB [auth TT]eS19
RB [auth SS]uS13
eL8 -
QB [auth RR]eS17
PB [auth QQ]uS9
OB [auth PP]uS19
NB [auth OO]uS11
MB [auth NN]uS15
LB [auth MM]eS12
KB [auth LL]uS17
JB [auth KK]eS10 -
IB [auth JJ]uS4
HB [auth II]eS8
uL30---
GB [auth HH]eS7
FB [auth GG]eS6
EB [auth FF]uS7
DB [auth EE]eS4
CB [auth DD]uS3
BB [auth CC]uS5---
AB [auth BB]eS1
ZA [auth AA]uS2---
YA [auth 9]18S ribosomal RNA---
XA [auth 8]5.8S ribosomal RNA---
eL6
WA [auth 7]5S ribosomal RNA---
VA [auth 5]28S ribosomal RNA---
UA [auth 3]tRNA(Lys)---
TA [auth 2]tRNA(Val)---
SA [auth 1]peptide---
RA [auth t]uL11
QA [auth s]uL10---
PA [auth r]eL28
OA [auth p]eL43
NA [auth o]eL42
uL18
MA [auth n]eL41
LA [auth m]eL40---
KA [auth l]eL39
JA [auth k]eL38---
IA [auth j]eL37
HA [auth i]eL36
GA [auth h]uL29
FA [auth g]eL34
EA [auth f]eL33
DA [auth e]eL32
uL4
CA [auth d]eL31
BA [auth c]eL30---
AA [auth b]eL29
Z [auth a]uL15
Y [auth Z]eL27
X [auth Y]uL24
W [auth X]uL23
V [auth W]eL24---
U [auth V]uL14
T [auth U]eL22---
uL3
S [auth T]eL21
R [auth S]eL20---
Q [auth R]eL19---
P [auth Q]eL18---
O [auth P]uL22---
N [auth O]uL13---
M [auth N]eL15
L [auth M]eL14
K [auth L]eL13---
uL5
uL2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IC [auth jj]IPR007209RNase L inhibitor RLI-like, possible metal-binding domainDomain
IC [auth jj]IPR017871ABC transporter-like, conserved siteConserved Site
IC [auth jj]IPR003439ABC transporter-like, ATP-binding domainDomain
IC [auth jj]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IC [auth jj]IPR003593AAA+ ATPase domainDomain
IC [auth jj]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IC [auth jj]IPR013283RLI1Family
IC [auth jj]IPR034348RLI, domain 1Domain
IC [auth jj]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
HC [auth ii]IPR004403Peptide chain release factor eRF1/aRF1Family
HC [auth ii]IPR005141eRF1 domain 2Domain
HC [auth ii]IPR042226eRF1, domain 2 superfamilyHomologous Superfamily
HC [auth ii]IPR024049eRF1, domain 1Homologous Superfamily
HC [auth ii]IPR005142eRF1 domain 3Domain
HC [auth ii]IPR005140eRF1/Pelota-like, N-terminal domainDomain
HC [auth ii]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FC [auth gg]IPR019775WD40 repeat, conserved siteConserved Site
FC [auth gg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
FC [auth gg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
FC [auth gg]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
FC [auth gg]IPR001680WD40 repeatRepeat
FC [auth gg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
EC [auth ff]IPR019954Ubiquitin conserved siteConserved Site
EC [auth ff]IPR000626Ubiquitin-like domainDomain
EC [auth ff]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
EC [auth ff]IPR002906Small ribosomal subunit protein eS31Domain
EC [auth ff]IPR019956Ubiquitin domainDomain
EC [auth ff]IPR050158Ubiquitin and ubiquitin-likeFamily
EC [auth ff]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
EC [auth ff]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DC [auth ee]IPR039415Ubiquitin-like protein FUBIDomain
DC [auth ee]IPR019956Ubiquitin domainDomain
DC [auth ee]IPR019954Ubiquitin conserved siteConserved Site
DC [auth ee]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
DC [auth ee]IPR000626Ubiquitin-like domainDomain
DC [auth ee]IPR006846Small ribosomal subunit protein eS30Family
CC [auth dd]IPR001209Small ribosomal subunit protein uS14Family
CC [auth dd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
CC [auth dd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
CC [auth dd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
BC [auth cc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
BC [auth cc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
BC [auth cc]IPR000289Small ribosomal subunit protein eS28Family
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR000702Large ribosomal subunit protein uL6-likeFamily
AC [auth bb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
AC [auth bb]IPR000592Small ribosomal subunit protein eS27Family
AC [auth bb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YB [auth ZZ]IPR004977Small ribosomal subunit protein eS25Family
YB [auth ZZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
XB [auth YY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
XB [auth YY]IPR001976Small ribosomal subunit protein eS24Family
XB [auth YY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XB [auth YY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
WB [auth XX]IPR006032Small ribosomal subunit protein uS12Family
WB [auth XX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WB [auth XX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
VB [auth WW]IPR000630Small ribosomal subunit protein uS8Family
VB [auth WW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
VB [auth WW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
UB [auth VV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
UB [auth VV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
UB [auth VV]IPR001931Small ribosomal subunit protein eS21Family
TB [auth UU]IPR001848Small ribosomal subunit protein uS10Family
TB [auth UU]IPR027486Small ribosomal subunit protein uS10 domainDomain
TB [auth UU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
TB [auth UU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
TB [auth UU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
SB [auth TT]IPR001266Small ribosomal subunit protein eS19Family
SB [auth TT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
SB [auth TT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
SB [auth TT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
RB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
RB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
RB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
RB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
QB [auth RR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
QB [auth RR]IPR001210Small ribosomal subunit protein eS17Family
QB [auth RR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
PB [auth QQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
PB [auth QQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PB [auth QQ]IPR000754Small ribosomal subunit protein uS9Family
PB [auth QQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
OB [auth PP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
OB [auth PP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
OB [auth PP]IPR002222Small ribosomal subunit protein uS19Family
OB [auth PP]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
NB [auth OO]IPR001971Small ribosomal subunit protein uS11Family
NB [auth OO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
NB [auth OO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
MB [auth NN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
MB [auth NN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
MB [auth NN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
MB [auth NN]IPR000589Small ribosomal subunit protein uS15Family
LB [auth MM]IPR000530Small ribosomal subunit protein eS12Family
LB [auth MM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
LB [auth MM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
LB [auth MM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
KB [auth LL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
KB [auth LL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KB [auth LL]IPR000266Small ribosomal subunit protein uS17Family
KB [auth LL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
KB [auth LL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
JB [auth KK]IPR037447Small ribosomal subunit protein eS10Family
JB [auth KK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
JB [auth KK]IPR005326Plectin/eS10, N-terminalDomain
IB [auth JJ]IPR002942RNA-binding S4 domainDomain
IB [auth JJ]IPR022801Small ribosomal subunit protein uS4Family
IB [auth JJ]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
IB [auth JJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IB [auth JJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IB [auth JJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
HB [auth II]IPR001047Small ribosomal subunit protein eS8Family
HB [auth II]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
HB [auth II]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
HB [auth II]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
GB [auth HH]IPR000554Small ribosomal subunit protein eS7Family
GB [auth HH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
FB [auth GG]IPR014401Small ribosomal subunit protein eS6-likeFamily
FB [auth GG]IPR001377Small ribosomal subunit protein eS6Family
FB [auth GG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
EB [auth FF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
EB [auth FF]IPR000235Small ribosomal subunit protein uS7Family
EB [auth FF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
EB [auth FF]IPR023798Small ribosomal subunit protein uS7 domainDomain
EB [auth FF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
DB [auth EE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
DB [auth EE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
DB [auth EE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
DB [auth EE]IPR002942RNA-binding S4 domainDomain
DB [auth EE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
DB [auth EE]IPR000876Small ribosomal subunit protein eS4Family
DB [auth EE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DB [auth EE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
DB [auth EE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
DB [auth EE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
DB [auth EE]IPR005824KOWDomain
CB [auth DD]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
CB [auth DD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
CB [auth DD]IPR057258Small ribosomal subunit protein uS3Family
CB [auth DD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
CB [auth DD]IPR004044K Homology domain, type 2Domain
CB [auth DD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
CB [auth DD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CB [auth DD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
AB [auth BB]IPR001593Small ribosomal subunit protein eS1Family
AB [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
AB [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR000915Large ribosomal subunit protein eL6Family
RA [auth t]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
RA [auth t]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
RA [auth t]IPR000911Ribosomal protein uL11Family
RA [auth t]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
RA [auth t]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
RA [auth t]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
PA [auth r]IPR029004Ribosomal eL28/Mak16Domain
PA [auth r]IPR002672Large ribosomal subunit protein eL28Family
OA [auth p]IPR002674Large ribosomal subunit protein eL43Family
OA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
NA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
NA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth o]IPR000552Large ribosomal subunit protein eL42Family
IPR057268Large ribosomal subunit protein uL18Family
IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
MA [auth n]IPR007836Large ribosomal subunit protein eS32Family
KA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
KA [auth l]IPR000077Large ribosomal subunit protein eL39Family
KA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
IA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IA [auth j]IPR001569Large ribosomal subunit protein eL37Family
IA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
IA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth i]IPR000509Large ribosomal subunit protein eL36Family
HA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
GA [auth h]IPR001854Large ribosomal subunit protein uL29Family
GA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
GA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
GA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
FA [auth g]IPR008195Large ribosomal subunit protein eL34Family
FA [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
FA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
EA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth f]IPR001780Large ribosomal subunit protein eL33Family
EA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
DA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DA [auth e]IPR001515Large ribosomal subunit protein eL32Family
DA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
IPR002136Large ribosomal subunit protein uL4Family
IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
CA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CA [auth d]IPR000054Large ribosomal subunit protein eL31Family
AA [auth b]IPR002673Large ribosomal subunit protein eL29Family
Z [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
Z [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Z [auth a]IPR030878Large ribosomal subunit protein uL15Family
Z [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
Z [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Y [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
Y [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
Y [auth Z]IPR005824KOWDomain
Y [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth Z]IPR001141Large ribosomal subunit protein eL27Family
Y [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
X [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
X [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth Y]IPR005824KOWDomain
X [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
W [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
W [auth X]IPR019985Large ribosomal subunit protein uL23Family
W [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
W [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
U [auth V]IPR000218Large ribosomal subunit protein uL14Family
U [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
S [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
S [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
S [auth T]IPR001147Large ribosomal subunit protein eL21Family
S [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
M [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
M [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
M [auth N]IPR000439Large ribosomal subunit protein eL15Family
L [auth M]IPR039660Large ribosomal subunit protein eL14Family
L [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR002132Large ribosomal subunit protein uL5Family
IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
HC [auth ii]Pharos:  P62495