3K3A | pdb_00003k3a

Crystal Structure of B/Perth Neuraminidase D197E mutant in complex with Oseltamivir

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3k3aa_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
B	d3k3ab_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
C	d3k3ac_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
D	d3k3ad_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
E	d3k3ae_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
F	d3k3af_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
H	d3k3ah_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
I	d3k3ai_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
J	d3k3aj_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
K	d3k3ak_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
L	d3k3al_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
M	d3k3am_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
N	d3k3an_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
O	d3k3ao_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
P	d3k3ap_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)
G	d3k3ag_	All beta proteins	6-bladed beta-propeller	Sialidases	Sialidases (neuraminidases)	Influenza neuraminidase	Viruses (Influenza B virus (B/Perth/211/2001) ) [TaxId: 343983 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Sialidases	8071712	3001607	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SdrG_C_C	e3k3aA1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
B	SdrG_C_C	e3k3aB1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
C	SdrG_C_C	e3k3aC1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
D	SdrG_C_C	e3k3aD1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
E	SdrG_C_C	e3k3aE1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
F	SdrG_C_C	e3k3aF1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
H	SdrG_C_C	e3k3aH1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
I	SdrG_C_C	e3k3aI1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
J	SdrG_C_C	e3k3aJ1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
K	SdrG_C_C	e3k3aK1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
L	SdrG_C_C	e3k3aL1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
M	SdrG_C_C	e3k3aM1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
N	SdrG_C_C	e3k3aN1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
O	SdrG_C_C	e3k3aO1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
P	SdrG_C_C	e3k3aP1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)
G	SdrG_C_C	e3k3aG1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
B	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
C	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
D	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
E	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
F	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
H	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
I	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
J	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
K	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
L	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
M	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
N	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
O	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
P	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)
G	2.120.10.10	Mainly Beta	6 Propeller	Neuraminidase		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	Neuraminidase	cation binding ion binding binding metal ion binding small molecule binding hydrolase activity, acting on glycosyl bonds alpha-sialidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity exo-alpha-sialidase activity catalytic activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part virion component virion membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR001860	Glycoside hydrolase, family 34	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR036278	Sialidase superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.