3M21 | pdb_00003m21

Crystal structure of DmpI from Helicobacter pylori Determined to 1.9 Angstroms resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3m21a_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	automated matches	automated matches	Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
B	d3m21b_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	automated matches	automated matches	Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
C	d3m21c_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	automated matches	automated matches	Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
E	d3m21e_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	automated matches	automated matches	Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
F	d3m21f_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	automated matches	automated matches	Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
D	d3m21d_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	automated matches	automated matches	Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e3m21A1	A: Retrovirus capsid protein	X: Retrovirus capsid protein N-terminal domain	H: PTS-regulatory domain, PRD	T: Lipocalin	F:	ECOD (20:10:01)
B		e3m21B1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: SdrG_C_C	F:	ECOD (20:10:01)
C		e3m21C1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: SdrG_C_C	F:	ECOD (20:10:01)
E		e3m21E1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: SdrG_C_C	F:	ECOD (20:10:01)
F		e3m21F1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: SdrG_C_C	F:	ECOD (20:10:01)
D		e3m21D1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: SdrG_C_C	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
B	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
C	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
E	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
F	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
D	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF01361	Tautomerase enzyme (Tautomerase)	Tautomerase enzyme	This family includes the enzyme 4-oxalocrotonate tautomerase Swiss:Q01468 that catalyses the ketonisation of 2-hydroxymuconate to 2-oxo-3-hexenedioate.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Probable tautomerase HP_0924	isomerase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR014347	Tautomerase/MIF superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR004370	4-oxalocrotonate tautomerase-like domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR018191	4-oxalocrotonate tautomerase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.