Crystal Structure of EphA2 ectodomain in complex with ephrin-A5
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Cupredoxins | 8081942 | 3000886 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Cupredoxins | 8081942 | 3000886 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | galactose-binding domain-like | 8082078 | 3000087 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | galactose-binding domain-like | 8082078 | 3000087 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | e3mx0D1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Cytochrome_CBB3 | F: | ECOD (20:10:01) | |
| B | e3mx0B1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Cytochrome_CBB3 | F: | ECOD (20:10:01) | |
| C | e3mx0C2 | A: amino-terminal domain of OmpATb | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: IMS | F: | ECOD (20:10:01) | |
| C | e3mx0C3 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: zf-PARP | F: | ECOD (20:10:01) | |
| A | e3mx0A2 | A: amino-terminal domain of OmpATb | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: IMS | F: | ECOD (20:10:01) | |
| A | e3mx0A3 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: zf-PARP | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
| B | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
| C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00812 | Ephrin (Ephrin) | Ephrin | Domain | ||
| PF01404 | Ephrin receptor ligand binding domain (Ephrin_lbd) | Ephrin receptor ligand binding domain | The Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1]. | Domain | |
| PF25599 | Ephrin cysteine rich domain (Ephrin_CRD) | Ephrin cysteine rich domain | This entry represents the cysteine-rich domain found in ephrin proteins. Ephrins are important cell surface proteins that act as ligands for Eph receptor tyrosine kinases | Domain | |
| PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | Domain |














