3MX0
Crystal Structure of EphA2 ectodomain in complex with ephrin-A5
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | galactose-binding domain-like | 8082078 | 3000087 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | galactose-binding domain-like | 8082078 | 3000087 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cupredoxins | 8081942 | 3000886 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cupredoxins | 8081942 | 3000886 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ephrin_lbd | e3mx0A3 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Ephrin_lbd | ECOD (1.6) |
A | fn3_9 | e3mx0A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_9 | ECOD (1.6) |
A | KOG0196,Laminin_EGF | e3mx0A4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: KOG0196,Laminin_EGF | ECOD (1.6) |
C | Ephrin_lbd | e3mx0C3 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Ephrin_lbd | ECOD (1.6) |
C | fn3_9 | e3mx0C2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_9 | ECOD (1.6) |
C | KOG0196,Laminin_EGF | e3mx0C4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: KOG0196,Laminin_EGF | ECOD (1.6) |
B | Ephrin | e3mx0B1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Ephrin | ECOD (1.6) |
D | Ephrin | e3mx0D1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Ephrin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
D | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01404 | Ephrin receptor ligand binding domain (Ephrin_lbd) | Ephrin receptor ligand binding domain | The Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1]. | Domain | |
PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | Domain | ||
PF00812 | Ephrin (Ephrin) | Ephrin | Domain |