Structure of the E.coli F1-ATP synthase inhibited by subunit Epsilon
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| X | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 8043174 | 3000182 | SCOP2B (2022-06-29) |
| X | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase C-terminal domain | 8036325 | 3000785 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase C-terminal domain | 8036325 | 3000785 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 8043174 | 3000182 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 8043174 | 3000182 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase C-terminal domain | 8036325 | 3000785 | SCOP2B (2022-06-29) |
| FA [auth f] | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 8043174 | 3000182 | SCOP2B (2022-06-29) |
| FA [auth f] | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase C-terminal domain | 8036325 | 3000785 | SCOP2B (2022-06-29) |
| W | SCOP2B Superfamily | ATP synthase gamma subunit-like | 8033225 | 3000451 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | ATP synthase gamma subunit-like | 8033225 | 3000451 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | ATP synthase gamma subunit-like | 8033225 | 3000451 | SCOP2B (2022-06-29) |
| EA [auth e] | SCOP2B Superfamily | ATP synthase gamma subunit-like | 8033225 | 3000451 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| DA [auth d] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| DA [auth d] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| DA [auth d] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| D | SCOP2 Family | ATP synthase alpha/beta N-terminal domain-like | 8056930 | 4002275 | SCOP2 (2022-06-29) |
| D | SCOP2 Family | ATP synthase nucleotide-binding domain-like | 8056932 | 4004011 | SCOP2 (2022-06-29) |
| D | SCOP2 Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2 (2022-06-29) |
| D | SCOP2 Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2 (2022-06-29) |
| D | SCOP2 Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2 (2022-06-29) |
| CA [auth c] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| CA [auth c] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| CA [auth c] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| BA [auth b] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
| BA [auth b] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
| BA [auth b] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
| Z | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| Z | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| Z | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| AA [auth a] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
| AA [auth a] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
| AA [auth a] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | ATP synthase alpha/beta N-terminal domain-like | 8056894 | 4002275 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | ATP synthase nucleotide-binding domain-like | 8056896 | 4004011 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| X | e3oaaX1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| P | e3oaaP1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| H | e3oaaH1 | A: Thioredoxin-like | X: Thioredoxin-like | H: Thioredoxin-like | T: NAD_binding_10 | F: | ECOD (20:10:01) | |
| FA [auth f] | e3oaaf1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| W | e3oaaW1 | A: DEATH domain | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: tRNA_anti-codon | F: | ECOD (20:10:01) | |
| O | e3oaaO1 | A: DEATH domain | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: tRNA_anti-codon | F: | ECOD (20:10:01) | |
| G | e3oaaG2 | A: jelly-roll | X: Double-stranded beta-helix | H: Double-stranded beta-helix | T: Ribosomal_L35p | F: | ECOD (20:10:01) | |
| EA [auth e] | e3oaae1 | A: DEATH domain | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: tRNA_anti-codon | F: | ECOD (20:10:01) | |
| V | e3oaaV1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| U | e3oaaU1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| T | e3oaaT1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| N | e3oaaN1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| M | e3oaaM1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| L | e3oaaL1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| F | e3oaaF1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| E | e3oaaE1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| DA [auth d] | e3oaad1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| D | e3oaaD1 | A: EF-hand | X: Insect pheromone/odorant-binding proteins | H: Insect pheromone/odorant-binding proteins | T: PH | F: | ECOD (20:10:01) | |
| CA [auth c] | e3oaac1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| BA [auth b] | e3oaab1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| Z | e3oaaZ1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| Y | e3oaaY1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| S | e3oaaS1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| R | e3oaaR1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| Q | e3oaaQ1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| K | e3oaaK1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| J | e3oaaJ1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| I | e3oaaI1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| C | e3oaaC1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| B | e3oaaB1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| AA [auth a] | e3oaaa1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: PQQ_2 | F: | ECOD (20:10:01) | |
| A | e3oaaA1 | A: Thioredoxin-like | X: Thioredoxin-like | H: Thioredoxin-like | T: Rubrerythrin | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| FA [auth f], H, P, X | PF02823 | ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N) | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ... | Domain |
| FA [auth f], H, P, X | PF00401 | ATP synthase, Delta/Epsilon chain, long alpha-helix domain (ATP-synt_DE) | ATP synthase, Delta/Epsilon chain, long alpha-helix domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sens ... | Domain |
| EA [auth e], G, O, W | PF00231 | ATP synthase (ATP-synt) | ATP synthase | Domain | |
| PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
| PF02823 | ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N) | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ... | Domain | |
| PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
| PF00231 | ATP synthase (ATP-synt) | ATP synthase | Domain | ||
| PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
| PF00401 | ATP synthase, Delta/Epsilon chain, long alpha-helix domain (ATP-synt_DE) | ATP synthase, Delta/Epsilon chain, long alpha-helix domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sens ... | Domain | |
| PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
| PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | Domain | ||
| PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
| PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | F-type ATPase | F1-ATPase in an autoinhibited conformation |














