Annotations: 3RMP

Structural basis for the recognition of attP substrates by P4-like integrases

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ADH_zinc_N	e3rmpA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: ADH_zinc_N	ECOD (v294.2)
B [auth C]	FtsJ	e3rmpC1	A: beta barrels	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: FtsJ	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.160.390	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain	Integrase, DNA-binding domain	CATH (4.3.0)
B [auth C]	3.30.160.390	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain	Integrase, DNA-binding domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth C]	PF13356	Arm DNA-binding domain (Arm-DNA-bind_3)	Arm DNA-binding domain	This DNA-binding domain is found at the N-terminus of a wide variety of phage integrase proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth F], F [auth H]	5'-D(TPAPTPTPGPGPTPGPGPTPCPAPTPTP*A)-3'	-	-	-
C [auth E], E [auth G]	5'-D(TPAPAPTPGPAPCPCPAPCPCPAPAPTP*A)-3'	-	-	-
A, B [auth C]	CP4-like integrase	DNA binding binding nucleic acid binding integrase activity catalytic activity, acting on DNA prophage integrase activity catalytic activity, acting on a nucleic acid catalytic activity site-specific recombinase activity	nucleobase-containing compound metabolic process DNA recombination metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process provirus excision latent virus replication viral latency viral process release from viral latency	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C]	IPR011010	DNA breaking-rejoining enzyme, catalytic core	Homologous Superfamily
A, B [auth C]	IPR038488	Integrase, DNA-binding domain superfamily	Homologous Superfamily
A, B [auth C]	IPR050808	Phage Integrase	Family
A, B [auth C]	IPR053876	Phage integrase, central domain	Domain
A, B [auth C]	IPR025166	Integrase, DNA-binding domain	Domain
A, B [auth C]	IPR010998	Integrase/recombinase, N-terminal	Homologous Superfamily
A, B [auth C]	IPR044068	Core-binding (CB) domain	Domain
A, B [auth C]	IPR002104	Integrase, catalytic domain	Domain
A, B [auth C]	IPR013762	Integrase-like, catalytic domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.