3VCP
The 2.2 Angstrom structure of Stc2 with proline bound in the active site
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rieske_5 | e3vcpA1 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: Rieske_5 | ECOD (1.6) |
A | Ring_hydroxyl_A | e3vcpA2 | A: a+b two layers | X: TBP-like | H: Bet v1-like (From Topology) | T: Bet v1-like | F: Ring_hydroxyl_A | ECOD (1.6) |
A | Rieske_1 | e3vcpA3 | A: few secondary structure elements | X: Trm112p-like (From Topology) | H: Trm112p-like (From Topology) | T: Trm112p-like | F: Rieske_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.380.10 | Alpha Beta | Alpha-Beta Complex | Naphthalene 1,2-dioxygenase Alpha Subunit | Chain A, domain 1 | CATH (4.3.0) |
A | 2.102.10.10 | Mainly Beta | 3-layer Sandwich | Rieske Iron-sulfur Protein | Rieske [2Fe-2S] iron-sulphur domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00848 | Ring hydroxylating alpha subunit (catalytic domain) (Ring_hydroxyl_A) | Ring hydroxylating alpha subunit (catalytic domain) | This family is the catalytic domain of aromatic-ring- hydroxylating dioxygenase systems. The active site contains a non-heme ferrous ion coordinated by three ligands. | Domain | |
PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Ring-hydroxylating dioxygenase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017941 | Rieske [2Fe-2S] iron-sulphur domain | Domain | |
IPR015881 | Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site | Binding Site | |
IPR036922 | Rieske [2Fe-2S] iron-sulphur domain superfamily | Homologous Superfamily | |
IPR001663 | Aromatic-ring-hydroxylating dioxygenase, alpha subunit | Family | |
IPR015879 | Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain | Domain |