3VE2 | pdb_00003ve2

The 2.1 angstrom crystal structure of Transferrin binding protein B (TbpB) from serogroup B M982 Neisseria meningitidis


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyN-lobe and C-lobe of Tf-binding protein B-like 8047021 4006246 SCOP2 (2022-06-29)
ASCOP2 FamilyN-lobe and C-lobe of Tf-binding protein B-like 8048882 4006246 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8052220 3002098 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8047030 3002098 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTbpB N-lobe and C-lobe handle domains-like 8052221 3002099 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTbpB N-lobe and C-lobe handle domains-like 8052222 3002099 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyTbpB N-lobe and C-lobe handle domains-like 8052221 3002099 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8052220 3002098 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8047030 3002098 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATbpB_Ae3ve2A3 A: beta barrelsX: Handle domain in transferrin-binding protein B (From Topology)H: Handle domain in transferrin-binding protein B (From Topology)T: Handle domain in transferrin-binding protein BF: TbpB_AECOD (1.6)
ATbpB_B_De3ve2A1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: TbpB_B_DECOD (1.6)
BTbpB_Ae3ve2B3 A: beta barrelsX: Handle domain in transferrin-binding protein B (From Topology)H: Handle domain in transferrin-binding protein B (From Topology)T: Handle domain in transferrin-binding protein BF: TbpB_AECOD (1.6)
BTbpB_B_De3ve2B1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: TbpB_B_DECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.128.250 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)
A2.40.160.90 Mainly Beta Beta Barrel Porin CATH (4.3.0)
A2.40.128.240 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)
B2.40.128.250 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)
B2.40.160.90 Mainly Beta Beta Barrel Porin CATH (4.3.0)
B2.40.128.240 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF17483C-lobe handle domain of Tf-binding protein B (TbpB_C)C-lobe handle domain of Tf-binding protein BBacterial lipoproteins represent a large group of specialised membrane proteins that perform a variety of functions including maintenance and stabilization of the cell envelope, protein targeting and transit to the outer membrane, membrane biogenesis ...Domain
A, B
PF01298C-lobe and N-lobe beta barrels of Tf-binding protein B (TbpB_B_D)C-lobe and N-lobe beta barrels of Tf-binding protein BBacterial lipoproteins represent a large group of specialized membrane proteins that perform a variety of functions including maintenance and stabilization of the cell envelope, protein targeting and transit to the outer membrane, membrane biogenesis ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Transferrin-binding protein 2- -