3W01 | pdb_00003w01

Crystal structure of PcrB complexed with PEG from Staphylococcus aureus subsp. aureus Mu3

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3w01a1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	FMN-linked oxidoreductases	PcrB protein homolog YerE	(Staphylococcus aureus subsp. aureus Mu3 ) [TaxId: 418127 ],	SCOPe (2.08)
A	d3w01a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus Mu3 ) [TaxId: 418127 ],	SCOPe (2.08)
B	d3w01b1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	FMN-linked oxidoreductases	PcrB protein homolog YerE	(Staphylococcus aureus subsp. aureus Mu3 ) [TaxId: 418127 ],	SCOPe (2.08)
B	d3w01b2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus Mu3 ) [TaxId: 418127 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	FMN-linked oxidoreductases	8064078	3000014	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	FMN-linked oxidoreductases	8064078	3000014	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e3w01A1	A: Globin-like	X: Globin-like	H: Globin-like	T: fn3	F:	ECOD (20:10:01)
B		e3w01B1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: FtsJ	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.390	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	FMN-linked oxidoreductases	CATH (4.3.0)
B	3.20.20.390	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	FMN-linked oxidoreductases	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Heptaprenylglyceryl phosphate synthase	prenyltransferase activity heptaprenylglyceryl phosphate synthase activity transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding	glycerophospholipid biosynthetic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process phospholipid biosynthetic process phospholipid metabolic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process metabolic process cellular process glycerolipid metabolic process glycerophospholipid biosynthetic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process phospholipid biosynthetic process phospholipid metabolic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process metabolic process cellular process glycerolipid metabolic process phosphorus metabolic process lipid metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR008205	Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase	Family
A, B	IPR038597	GGGP/HepGP synthase superfamily	Homologous Superfamily
A, B	IPR039074	GGGP/HepGP synthase group I	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.