3W78 | pdb_00003w78

Crystal Structure of azoreductase AzrC in complex with NAD(P)-inhibitor Cibacron Blue

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth C]	SCOP2B Superfamily	Flavoproteins	8080969	3001217	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Flavoproteins	8080969	3001217	SCOP2B (2022-06-29)
B [auth D]	SCOP2B Superfamily	Flavoproteins	8080969	3001217	SCOP2B (2022-06-29)
A	SCOP2 Family	Quinone reductase	8080968	4003674	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Flavoproteins	8080969	3001217	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth C]	DUF4170	e3w78C1	A: alpha bundles	X: DEATH domain	H: HTH	T: winged helix domain	F: DUF4170	ECOD (develop294)
C [auth B]	DUF4170	e3w78B1	A: alpha bundles	X: DEATH domain	H: HTH	T: winged helix domain	F: DUF4170	ECOD (develop294)
B [auth D]	CagX	e3w78D1	A: alpha bundles	X: DEATH domain	H: HTH	T: winged helix domain	F: CagX	ECOD (develop294)
A	NusG_II	e3w78A1	A: alpha bundles	X: Rossmann-like	H: Rossmann-related	T: Nucleotide-binding domain	F: NusG_II	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D [auth C]	3.40.50.360	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavodoxin domain	CATH (4.3.0)
C [auth B]	3.40.50.360	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavodoxin domain	CATH (4.3.0)
B [auth D]	3.40.50.360	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavodoxin domain	CATH (4.3.0)
A	3.40.50.360	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavodoxin domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth D], C [auth B], D [auth C]	FMN-dependent NADH-azoreductase	FMN binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding oxidoreductase activity, acting on NAD(P)H as acceptor oxidoreductase activity oxidoreductase activity, acting on NAD(P)H catalytic activity FMN binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding oxidoreductase activity, acting on NAD(P)H as acceptor oxidoreductase activity oxidoreductase activity, acting on NAD(P)H catalytic activity electron transfer activity cation binding metal ion binding oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth D], C [auth B], D [auth C]	IPR023048	NADH:quinone oxidoreductase, FMN-dependent	Family
A, B [auth D], C [auth B], D [auth C]	IPR003680	Flavodoxin-like fold	Domain
A, B [auth D], C [auth B], D [auth C]	IPR029039	Flavoprotein-like superfamily	Homologous Superfamily
A, B [auth D], C [auth B], D [auth C]	IPR050104	FMN-dependent NADH:quinone oxidoreductase, azoreductase type 1	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.