VP17, a capsid protein of bacteriophage P23-77
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e3zmnB3 | A: Fusion glycoprotein F2 | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Beta-barrel_RND | F: | ECOD (20:10:01) | |
| A | e3zmnA1 | A: jelly-roll | X: Nucleoplasmin-like/VP (viral coat and capsid proteins) | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) | T: | F: | ECOD (20:10:01) | |
| A | e3zmnA2 | A: jelly-roll | X: Nucleoplasmin-like/VP (viral coat and capsid proteins) | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) | T: VP17_central_barrel | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.120.1170 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| B | 2.60.40.3410 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| A | 2.60.120.1170 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| A | 2.60.40.3410 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF22210 | Large MCP VP17 central beta-barrel (VP17_central_barrel) | Large MCP VP17 central beta-barrel | This entry represents the central beta-barrel of VP17, the large major capsid protein of of bacteriophage P23-77 [1]. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR054005 | VP17, central beta-barrel | Domain |
