4AQZ | pdb_00004aqz

B2 domain of Neisseria meningitidis Pilus assembly protein PilQ

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	AMIN domain-like	8092185	4005368	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	AMIN domain-like	8092186	3002568	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	AMIN	e4aqzA1	A: alpha bundles	X: N0 domain in phage tail proteins and secretins-like	H: N0 domain in phage tail proteins and secretins	T: N0 domain in phage tail proteins and secretins	F: AMIN	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.3470	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF11741	AMIN domain (AMIN)	AMIN domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	TYPE IV PILUS BIOGENESIS AND COMPETENCE PROTEIN PILQ	-	DNA-mediated transformation cellular response to stimulus horizontal gene transfer response to stimulus establishment of competence for transformation cellular process establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region DNA-mediated transformation cellular response to stimulus horizontal gene transfer response to stimulus establishment of competence for transformation cellular process establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization intracellular protein localization	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR005644	NolW-like	Domain
A	IPR004846	Type II/III secretion system, secretin-like domain	Domain
A	IPR038591	NolW-like superfamily	Homologous Superfamily
A	IPR011662	Secretin/TonB, short N-terminal domain	Domain
A	IPR001775	GspD/PilQ family	Family
A	IPR004845	Type II secretion system protein GspD, conserved site	Conserved Site
A	IPR021731	AMIN domain	Domain
A	IPR051808	Type IV pilus biogenesis and competence protein	Family
A	IPR013355	Type IV pilus secretin PilQ	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.