4BLD | pdb_00004bld

Crystal structure of a human Suppressor of fused (SUFU)-GLI3p complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Suppressor of Fused, N-terminal domain	8036300	3002012	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Suppressor of Fused, N-terminal domain	8036300	3002012	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Suppressor of Fused, N-terminal domain	8036300	3002012	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Suppressor of Fused, N-terminal domain	8036300	3002012	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	POTRA	e4bldD3	A: alpha bundles	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (develop294)
D		e4bldD4	A: alpha bundles	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F:	ECOD (develop294)
D	LysR_substrate	e4bldD1	A: alpha bundles	X: Rossmann-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: LysR_substrate	ECOD (develop294)
C	POTRA	e4bldC2	A: alpha bundles	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (develop294)
C	LysR_substrate	e4bldC4	A: alpha bundles	X: Rossmann-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: LysR_substrate	ECOD (develop294)
B	TPP_enzyme_C	e4bldB4	A: alpha bundles	X: Glutamine synthetase-like	H: Glutamine synthetase/guanido kinase	T: Glutamine synthetase/guanido kinase	F: TPP_enzyme_C	ECOD (develop294)
B	LysR_substrate	e4bldB1	A: alpha bundles	X: Rossmann-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: LysR_substrate	ECOD (develop294)
A	SUFU	e4bldA1	A: alpha bundles	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: SUFU	ECOD (develop294)
A	Glutaredoxin	e4bldA2	A: alpha bundles	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: Glutaredoxin	ECOD (develop294)
A	LysR_substrate	e4bldA3	A: alpha bundles	X: Rossmann-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: LysR_substrate	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.30.1360.230	Alpha Beta	2-Layer Sandwich	Gyrase A	domain 2	CATH (4.3.0)
C	3.30.1360.230	Alpha Beta	2-Layer Sandwich	Gyrase A	domain 2	CATH (4.3.0)
B	3.30.1360.230	Alpha Beta	2-Layer Sandwich	Gyrase A	domain 2	CATH (4.3.0)
A	3.30.1360.230	Alpha Beta	2-Layer Sandwich	Gyrase A	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01547	Bacterial extracellular solute-binding protein (SBP_bac_1)	Bacterial extracellular solute-binding protein	-	Family
A, B, C, D	PF05076	Suppressor of fused protein (SUFU) (SUFU)	Suppressor of fused protein (SUFU)	SUFU, encoding the human orthologue of Drosophila suppressor of fused, appears to have a conserved role in the repression of Hedgehog signaling. SUFU exerts its repressor role by physically interacting with GLI proteins in both the cytoplasm and the ...	SUFU, encoding the human orthologue of Drosophila suppressor of fused, appears to have a conserved role in the repression of Hedgehog signaling. SUFU exerts its repressor role by physically interacting with GLI proteins in both the cytoplasm and the nucleus [1]. SUFU has been found to be a tumour-suppressor gene that predisposes individuals to medulloblastoma by modulating the SHH signaling pathway [2]. Genomic contextual analysis of bacterial SUFU versions revealed that they are immunity proteins against diverse nuclease toxins in polymorphic toxin systems [3].	Domain
A, B, C, D	PF12470	Suppressor of Fused Gli/Ci N terminal binding domain (SUFU_C)	Suppressor of Fused Gli/Ci N terminal binding domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, F, G, H	TRANSCRIPTIONAL ACTIVATOR GLI3	histone deacetylase binding protein binding binding enzyme binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity histone acetyltransferase binding beta-catenin binding protein-containing complex binding histone deacetylase binding protein binding binding enzyme binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity histone acetyltransferase binding beta-catenin binding protein-containing complex binding mediator complex binding DNA-binding transcription factor activity, RNA polymerase II-specific RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development head development cellular developmental process forebrain generation of neurons forebrain development brain development nervous system development developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development head development cellular developmental process forebrain generation of neurons forebrain development brain development nervous system development forebrain radial glial cell differentiation generation of neurons neurogenesis gliogenesis central nervous system development glial cell differentiation cell differentiation cellular process radial glial cell differentiation thymic T cell selection hemopoiesis cell activation cell development mononuclear cell differentiation lymphocyte activation lymphocyte differentiation leukocyte activation T cell differentiation in thymus T cell activation immune system process negative thymic T cell selection T cell differentiation negative T cell selection T cell selection leukocyte differentiation tongue development sensory organ development regulation of multicellular organismal development regulation of biological process regulation of developmental process biological regulation regulation of bone development skeletal system development regulation of multicellular organismal process bone development anatomical structure morphogenesis limb development appendage development appendage morphogenesis limb morphogenesis negative regulation of cell population proliferation regulation of stem cell proliferation cell population proliferation regulation of cellular process negative regulation of biological process negative regulation of stem cell proliferation stem cell proliferation regulation of cell population proliferation negative regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process connective tissue development tissue development chondrocyte differentiation cartilage development negative regulation of RNA biosynthetic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of RNA metabolic process regulation of leukocyte differentiation regulation of leukocyte activation regulation of alpha-beta T cell activation regulation of cell activation regulation of cell differentiation positive regulation of T cell differentiation regulation of cell development positive regulation of developmental process positive regulation of cell activation positive regulation of leukocyte activation alpha-beta T cell activation regulation of immune system process positive regulation of immune system process positive regulation of T cell activation positive regulation of cell development positive regulation of alpha-beta T cell activation regulation of leukocyte cell-cell adhesion positive regulation of multicellular organismal process positive regulation of alpha-beta T cell differentiation positive regulation of biological process positive regulation of leukocyte cell-cell adhesion regulation of alpha-beta T cell differentiation leukocyte cell-cell adhesion positive regulation of cell-cell adhesion regulation of T cell differentiation positive regulation of lymphocyte activation cell adhesion alpha-beta T cell differentiation cell-cell adhesion positive regulation of hemopoiesis positive regulation of cell differentiation regulation of cell-cell adhesion positive regulation of cellular process regulation of lymphocyte differentiation positive regulation of cell adhesion regulation of cell adhesion regulation of T cell activation regulation of hemopoiesis positive regulation of leukocyte differentiation positive regulation of lymphocyte differentiation regulation of lymphocyte activation ear development tube development anterior semicircular canal development semicircular canal development inner ear development digestive system development hindgut morphogenesis digestive tract development tube morphogenesis digestive tract morphogenesis hindgut development cranial suture morphogenesis craniofacial suture morphogenesis sagittal suture morphogenesis cranial skeletal system development skeletal system morphogenesis animal organ morphogenesis bone morphogenesis lateral semicircular canal development negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death pigment cell differentiation pigmentation developmental pigmentation melanocyte differentiation negative regulation of cell adhesion negative regulation of T cell differentiation negative regulation of hemopoiesis negative regulation of leukocyte differentiation negative regulation of T cell activation negative regulation of leukocyte cell-cell adhesion negative regulation of cell-cell adhesion negative regulation of lymphocyte differentiation negative regulation of multicellular organismal process negative regulation of leukocyte activation negative regulation of alpha-beta T cell differentiation negative regulation of lymphocyte activation negative regulation of cell differentiation negative regulation of developmental process negative regulation of cell activation negative regulation of cell development negative regulation of immune system process negative regulation of alpha-beta T cell activation axonogenesis cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development cell morphogenesis cellular component organization cell projection morphogenesis neuron differentiation neuron projection morphogenesis cellular component organization or biogenesis plasma membrane bounded cell projection organization axon guidance axon development cell morphogenesis involved in neuron differentiation neuron projection guidance neuron development forebrain dorsal/ventral pattern formation pattern specification process regionalization dorsal/ventral pattern formation forebrain regionalization embryonic organ morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryonic morphogenesis embryonic neurocranium morphogenesis embryo development embryo development ending in birth or egg hatching embryonic skeletal system development embryonic organ development embryonic skeletal system morphogenesis frontal suture morphogenesis regulation of cartilage development regulation of chondrocyte differentiation negative regulation of cartilage development negative regulation of chondrocyte differentiation proximal/distal pattern formation embryonic limb morphogenesis embryonic appendage morphogenesis embryonic digit morphogenesis negative regulation of neuron differentiation regulation of neuron differentiation neuroblast proliferation neural precursor cell proliferation glial cell migration telencephalon glial cell migration cerebral cortex development telencephalon cell migration forebrain cell migration cell migration cell motility layer formation in cerebral cortex cerebral cortex cell migration cerebral cortex radially oriented cell migration pallium development anatomical structure formation involved in morphogenesis cerebral cortex radial glia-guided migration telencephalon development mammary gland specification mammary gland morphogenesis mammary gland development gland development specification of animal organ identity mammary gland formation gland morphogenesis animal organ formation cellular response to stimulus response to stimulus signaling cell communication dorsal/ventral neural tube patterning smoothened signaling pathway involved in dorsal/ventral neural tube patterning signal transduction epithelium development neural tube development cell surface receptor signaling pathway smoothened signaling pathway neural tube patterning smoothened signaling pathway involved in ventral spinal cord patterning cell fate commitment involved in pattern specification cell differentiation in spinal cord central nervous system neuron differentiation spinal cord development smoothened signaling pathway involved in ventral spinal cord interneuron specification ventral spinal cord interneuron specification ventral spinal cord interneuron differentiation neuron fate specification neuron fate commitment spinal cord dorsal/ventral patterning cell fate specification involved in pattern specification cell fate specification ventral spinal cord interneuron fate commitment spinal cord patterning ventral spinal cord development cell fate commitment negative regulation of signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway regulation of signal transduction negative regulation of cell communication negative regulation of Wnt signaling pathway Wnt signaling pathway regulation of signaling regulation of Wnt signaling pathway negative regulation of response to stimulus negative regulation of signal transduction negative regulation of canonical Wnt signaling pathway regulation of response to stimulus regulation of cell communication artery development vasculature development blood vessel development establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport regulation of localization regulation of protein localization positive regulation of nucleocytoplasmic transport positive regulation of establishment of protein localization regulation of protein localization to nucleus positive regulation of protein transport regulation of protein import into nucleus positive regulation of intracellular transport regulation of intracellular transport regulation of transport positive regulation of protein localization to nucleus regulation of establishment of protein localization positive regulation of protein import into nucleus regulation of nucleocytoplasmic transport regulation of protein transport positive regulation of transport regulation of cellular localization positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport in utero embryonic development camera-type eye morphogenesis eye development visual system development eye morphogenesis sensory organ morphogenesis camera-type eye development sensory system development metanephros development kidney development renal system development lymphocyte apoptotic process thymocyte apoptotic process leukocyte apoptotic process T cell apoptotic process mesonephric epithelium development kidney epithelium development nephron morphogenesis branching morphogenesis of an epithelial tube nephron tubule morphogenesis nephron epithelium morphogenesis nephron tubule development ureteric bud morphogenesis branching involved in ureteric bud morphogenesis renal tubule development epithelial tube morphogenesis nephron development nephron epithelium development ureteric bud development mesonephros development morphogenesis of an epithelium tissue morphogenesis kidney morphogenesis morphogenesis of a branching structure mesonephric tubule morphogenesis mesonephric tubule development renal tubule morphogenesis morphogenesis of a branching epithelium positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process cell differentiation involved in kidney development ossification osteoblast differentiation nose morphogenesis nose development respiratory system development hippocampus development limbic system development oligodendrocyte differentiation odontogenesis of dentin-containing tooth odontogenesis embryonic digestive tract development cranial nerve morphogenesis nerve development cranial nerve development optic nerve morphogenesis optic nerve development respiratory tube development lung development positive regulation of chondrocyte differentiation positive regulation of cartilage development protein maturation proteolysis protein processing protein metabolic process developmental growth growth negative regulation of smoothened signaling pathway regulation of smoothened signaling pathway spinal cord motor neuron cell fate specification smoothened signaling pathway involved in spinal cord motor neuron cell fate specification spinal cord motor neuron differentiation cell proliferation in forebrain lateral ganglionic eminence cell proliferation subpallium cell proliferation in forebrain subpallium development regulation of osteoblast differentiation positive regulation of osteoblast differentiation embryonic digestive tract morphogenesis larynx development larynx morphogenesis behavior vocalization behavior lambdoid suture morphogenesis positive regulation of nervous system development positive regulation of cell population proliferation regulation of neuroblast proliferation regulation of neurogenesis regulation of nervous system development positive regulation of neurogenesis regulation of neural precursor cell proliferation positive regulation of neural precursor cell proliferation positive regulation of neuroblast proliferation anterior/posterior pattern specification roof of mouth development	membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule nuclear body nucleoplasm organelle lumen supramolecular complex nuclear ribonucleoprotein granule nuclear lumen cytosol protein-containing complex GLI-SUFU complex nucleolus ciliary tip transcription regulator complex transcription repressor complex ciliary base
A, B, C, D	MALTOSE-BINDING PERIPLASMIC PROTEIN, SUPPRESSOR OF FUSED HOMOLOG	transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding binding disaccharide binding carbohydrate binding maltose binding molecular sequestering activity protein sequestering activity transcription corepressor activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding binding disaccharide binding carbohydrate binding maltose binding molecular sequestering activity protein sequestering activity transcription corepressor activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity protein binding kinase binding enzyme binding protein kinase binding beta-catenin binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cell chemotaxis chemotaxis response to external stimulus cellular response to chemical stimulus taxis response to chemical cell migration cell motility cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cell chemotaxis chemotaxis response to external stimulus cellular response to chemical stimulus taxis response to chemical cell migration cell motility locomotion localization transport carbohydrate transport oligosaccharide transport disaccharide transport establishment of localization maltose transport polysaccharide localization dextrin transport macromolecule localization maltodextrin transmembrane transport polysaccharide transport response to disaccharide response to oxygen-containing compound detection of maltose stimulus detection of stimulus response to carbohydrate detection of chemical stimulus detection of disaccharide stimulus response to maltose detection of carbohydrate stimulus negative regulation of protein transport regulation of localization establishment of protein localization cellular localization negative regulation of nucleocytoplasmic transport regulation of cellular process nucleocytoplasmic transport regulation of protein localization nuclear transport negative regulation of biological process negative regulation of intracellular protein transport regulation of protein localization to nucleus negative regulation of transport negative regulation of protein import into nucleus import into nucleus regulation of protein import into nucleus establishment of localization in cell protein import into nucleus negative regulation of cellular process intracellular protein localization regulation of intracellular transport negative regulation of protein localization negative regulation of intracellular transport regulation of biological process regulation of transport biological regulation regulation of establishment of protein localization negative regulation of establishment of protein localization intracellular transport regulation of nucleocytoplasmic transport protein localization to nucleus regulation of protein transport negative regulation of protein localization to nucleus establishment of protein localization to organelle protein transport regulation of cellular localization protein localization to organelle regulation of intracellular protein transport intracellular protein transport maintenance of protein location maintenance of location maintenance of location in cell maintenance of protein location in cell maintenance of protein localization in organelle developmental process heart development multicellular organismal process animal organ development ventricular septum development circulatory system development multicellular organism development cardiac septum development cardiac chamber development anatomical structure development cardiac ventricle development system development skin development regulation of osteoblast differentiation regulation of developmental process cellular developmental process negative regulation of osteoblast differentiation negative regulation of developmental process regulation of cell differentiation osteoblast differentiation ossification cell differentiation negative regulation of cell differentiation smoothened signaling pathway involved in ventral spinal cord patterning signaling cell fate commitment involved in pattern specification pattern specification process cell differentiation in spinal cord cell communication neurogenesis central nervous system neuron differentiation spinal cord development smoothened signaling pathway involved in ventral spinal cord interneuron specification ventral spinal cord interneuron specification neuron differentiation ventral spinal cord interneuron differentiation signal transduction neuron fate specification cell surface receptor signaling pathway neuron fate commitment spinal cord dorsal/ventral patterning cell fate specification involved in pattern specification nervous system development cell fate specification smoothened signaling pathway regionalization ventral spinal cord interneuron fate commitment generation of neurons dorsal/ventral pattern formation central nervous system development spinal cord patterning ventral spinal cord development cell fate commitment catabolic process regulation of ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of primary metabolic process negative regulation of protein catabolic process modification-dependent macromolecule catabolic process protein metabolic process negative regulation of protein metabolic process negative regulation of ubiquitin-dependent protein catabolic process negative regulation of macromolecule metabolic process negative regulation of catabolic process regulation of protein metabolic process negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process modification-dependent protein catabolic process metabolic process ubiquitin-dependent protein catabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process artery development aorta development vasculature development blood vessel development negative regulation of signaling regulation of signal transduction negative regulation of cell communication negative regulation of smoothened signaling pathway regulation of smoothened signaling pathway regulation of signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of response to stimulus regulation of cell communication regulation of cellular response to drug cellular response to xenobiotic stimulus regulation of response to drug positive regulation of biological process positive regulation of response to drug response to xenobiotic stimulus positive regulation of response to stimulus positive regulation of cellular response to drug positive regulation of cellular process spinal cord motor neuron cell fate specification smoothened signaling pathway involved in spinal cord motor neuron cell fate specification spinal cord motor neuron differentiation embryonic epithelial tube formation chordate embryonic development tube formation embryo development epithelial tube formation tube morphogenesis primary neural tube formation embryo development ending in birth or egg hatching epithelial tube morphogenesis morphogenesis of embryonic epithelium epithelium development neural tube development tube development embryonic morphogenesis morphogenesis of an epithelium tissue development anatomical structure morphogenesis tissue morphogenesis neural tube closure neural tube formation anatomical structure formation involved in morphogenesis tube closure spermatid development spermatid differentiation sexual reproduction spermatogenesis reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation male gamete generation germ cell development RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription dorsal/ventral neural tube patterning neural tube patterning negative regulation of RNA biosynthetic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of RNA metabolic process coronary vasculature development heart morphogenesis embryonic heart tube development embryonic heart tube morphogenesis heart looping determination of bilateral symmetry animal organ morphogenesis embryonic organ development determination of left/right symmetry specification of symmetry embryonic organ morphogenesis determination of heart left/right asymmetry left/right pattern formation	ATPase dependent transmembrane transport complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex ATP-binding cassette (ABC) transporter complex cell periphery cellular anatomical structure transmembrane transporter complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing maltose transport complex periplasmic space ATPase dependent transmembrane transport complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex ATP-binding cassette (ABC) transporter complex cell periphery cellular anatomical structure transmembrane transporter complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing maltose transport complex periplasmic space outer membrane-bounded periplasmic space cell envelope membrane-bounded organelle cell projection organelle cilium plasma membrane bounded cell projection intracellular anatomical structure cytoplasm cytosol ciliary tip nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen nuclear lumen GLI-SUFU complex ciliary base

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E, F, G, H	IPR056436	ZIC1-5/GLI1-3like, C2H2 zinc finger	Domain
E, F, G, H	IPR043359	C2H2-type zinc-finger protein GLI-like	Family
E, F, G, H	IPR036236	Zinc finger C2H2 superfamily	Homologous Superfamily
E, F, G, H	IPR013087	Zinc finger C2H2-type	Domain
A, B, C, D	IPR006061	Solute-binding family 1, conserved site	Conserved Site
A, B, C, D	IPR006060	Maltose/Cyclodextrin ABC transporter, substrate-binding protein	Family
A, B, C, D	IPR006059	Bacterial-type extracellular solute-binding protein	Family
A, B, C, D	IPR037181	Suppressor of fused, N-terminal	Homologous Superfamily
A, B, C, D	IPR038489	Suppressor of fused, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR020941	Suppressor of fused-like domain	Domain
A, B, C, D	IPR007768	Suppressor of fused	Family
A, B, C, D	IPR016591	Suppressor of fused, eukaryotic	Family
A, B, C, D	IPR024314	Suppressor of fused C-terminal	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
E, F, G, H	Pharos: P10071	Pallister-hall syndrome Greig cephalopolysyndactyly syndrome polydactyly acrocallosal syndrome polydactyly, postaxial, type A1 polysyndactyly 4 gastrointestinal stromal tumor neural tube defect congenital hypothalamic hamartoma syndrome psoriasis synostosis hereditary diffuse gastric adenocarcinoma hypopigmentation of the skin iniencephaly malignant ependymoma Pallister-hall syndrome Greig cephalopolysyndactyly syndrome polydactyly acrocallosal syndrome polydactyly, postaxial, type A1 polysyndactyly 4 gastrointestinal stromal tumor neural tube defect congenital hypothalamic hamartoma syndrome psoriasis synostosis hereditary diffuse gastric adenocarcinoma hypopigmentation of the skin iniencephaly malignant ependymoma Acrania medulloblastoma acrocephalosyndactyly neurenteric cyst breast cancer ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia craniorachischisis postaxial polydactyly type A gastric cancer Sjogren syndrome glioblastoma hydrocephalus intellectual disability malignant glioma atypical teratoid rhabdoid tumor osteogenesis imperfecta congenital anomaly of kidney and urinary tract craniosynostosis postaxial polydactyly type B gastric neoplasm tethered spinal cord syndrome lung carcinoma autosomal dominant Aarskog syndrome osteosarcoma colorectal cancer pancreatic intraductal papillary-mucinous carcinoma diastematomyelia
A, B, C, D	Pharos: Q9UMX1	nevoid basal cell carcinoma syndrome medulloblastoma familial meningioma skin basal cell carcinoma gastrointestinal stromal tumor Joubert syndrome 32 medullomyoblastoma with myogenic differentiation childhood medulloblastoma melanotic medulloblastoma adult medulloblastoma Meningiomas, Multiple ovarian cancer skin pigmented basal cell carcinoma acrocallosal syndrome allergic rhinitis nevoid basal cell carcinoma syndrome medulloblastoma familial meningioma skin basal cell carcinoma gastrointestinal stromal tumor Joubert syndrome 32 medullomyoblastoma with myogenic differentiation childhood medulloblastoma melanotic medulloblastoma adult medulloblastoma Meningiomas, Multiple ovarian cancer skin pigmented basal cell carcinoma acrocallosal syndrome allergic rhinitis cancer desmoplastic/nodular medulloblastoma prostate carcinoma autism spectrum disorder endogenous depression holoprosencephaly bipolar disorder hydrocephalus medulloblastoma with extensive nodularity

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.