4CBV | pdb_00004cbv

X-ray structure of full-length ComE from Streptococcus pneumoniae.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyLytTr domain-like 8045872 4004734 SCOP2 (2022-06-29)
BSCOP2 FamilyCheY-related 8092321 4003632 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyChromo domain-like 8092319 3000161 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyCheY-like 8092322 3001156 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyChromo domain-like 8092320 3000161 SCOP2 (2022-06-29)
FSCOP2B SuperfamilyCheY-like 8092322 3001156 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyChromo domain-like 8092320 3000161 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyChromo domain-like 8092319 3000161 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCheY-like 8092322 3001156 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyChromo domain-like 8092320 3000161 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyChromo domain-like 8092319 3000161 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyChromo domain-like 8092319 3000161 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyChromo domain-like 8092320 3000161 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCheY-like 8092322 3001156 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyChromo domain-like 8092319 3000161 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyChromo domain-like 8092320 3000161 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCheY-like 8092322 3001156 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyChromo domain-like 8092319 3000161 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCheY-like 8092322 3001156 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyChromo domain-like 8092320 3000161 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4cbvB1 A: Glycosyl hydrolase domain-likeX: alpha/alpha toroidH: alpha/alpha toroidT: QueFF:ECOD (20:10:01)
Fe4cbvF1 A: Thioredoxin-likeX: Thioredoxin-likeH: Thioredoxin-likeT: PrismaneF:ECOD (20:10:01)
Ee4cbvE1 A: Glycosyl hydrolase domain-likeX: alpha/alpha toroidH: alpha/alpha toroidT: QueFF:ECOD (20:10:01)
De4cbvD1 A: Glycosyl hydrolase domain-likeX: alpha/alpha toroidH: alpha/alpha toroidT: QueFF:ECOD (20:10:01)
Ce4cbvC1 A: Glycosyl hydrolase domain-likeX: alpha/alpha toroidH: alpha/alpha toroidT: QueFF:ECOD (20:10:01)
Ae4cbvA1 A: DEATH domainX: 6-phosphogluconate dehydrogenase C-terminal domain-likeH: 6-phosphogluconate dehydrogenase C-terminal domain-likeT: CblDF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
B2.40.50.1020 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) LytTr DNA-binding domainCATH (4.3.0)
F3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
F2.40.50.1020 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) LytTr DNA-binding domainCATH (4.3.0)
E3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
E2.40.50.1020 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) LytTr DNA-binding domainCATH (4.3.0)
D3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
D2.40.50.1020 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) LytTr DNA-binding domainCATH (4.3.0)
C3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
C2.40.50.1020 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) LytTr DNA-binding domainCATH (4.3.0)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
A2.40.50.1020 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) LytTr DNA-binding domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
COME - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011006CheY-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR001789Signal transduction response regulator, receiver domainDomain
A, B, C, D, E
IPR007492LytTR DNA-binding domainDomain
A, B, C, D, E
IPR046947Transcriptional regulatory protein LytR-likeFamily