4D5D | pdb_00004d5d

Crystal structure of CymA from Klebsiella oxytoca

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyPorins 8095914 3000224 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPorins 8095914 3000224 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSas-5-like_implicoe4d5dB1 A: alpha bundlesX: OB-foldH: OB domain in putative lipoprotein BF3042-related proteinsT: OB domain in putative lipoprotein BF3042-related proteinsF: Sas-5-like_implicoECOD (develop294)
ASas-5-like_implicoe4d5dA1 A: alpha bundlesX: OB-foldH: OB domain in putative lipoprotein BF3042-related proteinsT: OB domain in putative lipoprotein BF3042-related proteinsF: Sas-5-like_implicoECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
CYMA- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelHomologous Superfamily
A, B
IPR031609Cyclodextrin porin CymAFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: BETA-BARRELBeta-Barrel Membrane Proteins: Porins and RelativesCymA monomeric outer membrane protein (NHis-SeMet)