4DBG
Crystal structure of HOIL-1L-UBL complexed with a HOIP-UBA derivative
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | HOIP UBA tandem repeat region-like | 8045974 | 4004794 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | UBA-like | 8092498 | 3001235 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | UBA-like | 8092497 | 3001235 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | UBA-like | 8092515 | 3001235 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | HOIP-UBA_C | e4dbgB2 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: HOIP-UBA_C | ECOD (1.6) |
B | HOIP-UBA_N | e4dbgB1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: HOIP-UBA_N | ECOD (1.6) |
A | ubiquitin_2 | e4dbgA1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 6.10.140.1100 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
B | 1.10.8.10 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16678 | HOIP UBA domain pair (HOIP-UBA) | HOIP UBA domain pair | - | Family | |