Co-crystal structure of the PPIase domain of FKBP51, Rapamycin and the FRB fragment of mTOR at low pH
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Rotamase-like | 8042824 | 3000622 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | Rotamase-like | 8042824 | 3000622 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e4drhA1 | A: Alpha-beta plaits | X: Family B DNA polymerase insertion domain | H: Family B DNA polymerase insertion domain | T: PHP | F: | ECOD (20:10:01) | |
| C [auth D] | e4drhD2 | A: DEATH domain | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| D [auth E] | e4drhE1 | A: Alpha-beta plaits | X: Family B DNA polymerase insertion domain | H: Family B DNA polymerase insertion domain | T: PHP | F: | ECOD (20:10:01) | |
| B | e4drhB1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: ABC_tran | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
| C [auth D] | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
| D [auth E] | 1.20.120.150 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | FKBP12-rapamycin binding domain | CATH (4.3.0) |
| B | 1.20.120.150 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | FKBP12-rapamycin binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, C [auth D] | PF00254 | FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) | FKBP-type peptidyl-prolyl cis-trans isomerase | Domain | |
| B, D [auth E] | PF08771 | FKBP12-rapamycin binding domain (FRB_dom) | FKBP12-rapamycin binding domain | The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ... | Domain |














