4EJR
Crystal structure of major capsid protein S domain from rabbit hemorrhagic disease virus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rhv_4 | e4ejrA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_4 | ECOD (1.6) |
B | Rhv_4 | e4ejrB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_4 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
B | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001205 | RNA-directed RNA polymerase, C-terminal domain | Domain | |
IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR014759 | Helicase, superfamily 3, single-stranded RNA virus | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR000317 | Peptidase C24, Calicivirus polyprotein Orf1 | Domain | |
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR004005 | Calicivirus coat protein | Domain | |
IPR004004 | Helicase/polymerase/peptidase polyprotein, Calicivirus-type | Family | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily | |
IPR033703 | Picornavirus/Calicivirus coat protein | Domain | |
IPR007094 | RNA-directed RNA polymerase, catalytic domain | Domain | |
IPR049434 | VPg | Domain | |
IPR000605 | Helicase, superfamily 3, single-stranded DNA/RNA virus | Domain |