4FZD | pdb_00004fzd

Crystal structure of MST4-MO25 complex with WSF motif

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Protein kinase-like (PK-like)	8062549	3000066	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ARM repeat-like	8041962	3000116	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	ABC_tran	e4fzdB1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (develop294)
A	Rrf2	e4fzdA1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: Rrf2	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.200.20	Alpha Beta	2-Layer Sandwich	Phosphorylase Kinase	domain 1	CATH (4.3.0)
B	1.10.510.10	Mainly Alpha	Orthogonal Bundle	Transferase(Phosphotransferase)	domain 1	CATH (4.3.0)
A	1.25.10.10	Mainly Alpha	Alpha Horseshoe	Leucine-rich Repeat Variant	Leucine-rich Repeat Variant	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain
A	PF08569	Mo25-like (Mo25)	Mo25-like	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C	C-terminal peptide from Serine/threonine-protein kinase MST4	catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding identical protein binding protein binding protein homodimerization activity protein dimerization activity protein serine/threonine kinase activity	regulation of cellular process regulation of cellular component organization positive regulation of cellular component organization cell projection organization positive regulation of microvillus assembly positive regulation of biological process plasma membrane bounded cell projection assembly microvillus organization cellular component biogenesis cellular component organization regulation of microvillus assembly cellular component assembly positive regulation of cell projection organization cellular component organization or biogenesis regulation of cellular process regulation of cellular component organization positive regulation of cellular component organization cell projection organization positive regulation of microvillus assembly positive regulation of biological process plasma membrane bounded cell projection assembly microvillus organization cellular component biogenesis cellular component organization regulation of microvillus assembly cellular component assembly positive regulation of cell projection organization cellular component organization or biogenesis positive regulation of cellular process regulation of biological process plasma membrane bounded cell projection organization positive regulation of cellular component biogenesis regulation of cell projection organization regulation of cell projection assembly biological regulation regulation of cellular component biogenesis regulation of plasma membrane bounded cell projection assembly regulation of microvillus organization microvillus assembly cellular process cell projection assembly regulation of plasma membrane bounded cell projection organization positive regulation of plasma membrane bounded cell projection assembly apoptotic process cell death programmed cell death regulation of apoptotic process regulation of programmed cell death cellular response to stimulus response to oxidative stress cellular response to chemical stimulus response to stimulus cellular response to stress response to stress response to chemical cellular response to oxidative stress cellular response to chemical stress protein phosphorylation protein autophosphorylation phosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process cellular response to nutrient levels response to nutrient levels response to starvation cellular response to starvation negative regulation of locomotion regulation of cell motility negative regulation of biological process regulation of locomotion negative regulation of cellular process regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion signaling signal transduction intracellular signal transduction cell communication	cellular anatomical structure membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space cellular anatomical structure membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle Golgi-associated vesicle cytoplasm cytosol vesicle membrane organelle membrane Golgi apparatus endomembrane system perinuclear region of cytoplasm FAR/SIN/STRIPAK complex protein-containing complex
B	Serine/threonine-protein kinase MST4	catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding identical protein binding protein binding protein homodimerization activity protein dimerization activity protein serine/threonine kinase activity	regulation of cellular process regulation of cellular component organization positive regulation of cellular component organization cell projection organization positive regulation of microvillus assembly positive regulation of biological process plasma membrane bounded cell projection assembly microvillus organization cellular component biogenesis cellular component organization regulation of microvillus assembly cellular component assembly positive regulation of cell projection organization cellular component organization or biogenesis regulation of cellular process regulation of cellular component organization positive regulation of cellular component organization cell projection organization positive regulation of microvillus assembly positive regulation of biological process plasma membrane bounded cell projection assembly microvillus organization cellular component biogenesis cellular component organization regulation of microvillus assembly cellular component assembly positive regulation of cell projection organization cellular component organization or biogenesis positive regulation of cellular process regulation of biological process plasma membrane bounded cell projection organization positive regulation of cellular component biogenesis regulation of cell projection organization regulation of cell projection assembly biological regulation regulation of cellular component biogenesis regulation of plasma membrane bounded cell projection assembly regulation of microvillus organization microvillus assembly cellular process cell projection assembly regulation of plasma membrane bounded cell projection organization positive regulation of plasma membrane bounded cell projection assembly apoptotic process cell death programmed cell death regulation of apoptotic process regulation of programmed cell death cellular response to stimulus response to oxidative stress cellular response to chemical stimulus response to stimulus cellular response to stress response to stress response to chemical cellular response to oxidative stress cellular response to chemical stress protein phosphorylation protein autophosphorylation phosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process cellular response to nutrient levels response to nutrient levels response to starvation cellular response to starvation negative regulation of locomotion regulation of cell motility negative regulation of biological process regulation of locomotion negative regulation of cellular process regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion signaling signal transduction intracellular signal transduction cell communication	cellular anatomical structure membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space cellular anatomical structure membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle Golgi-associated vesicle cytoplasm cytosol vesicle membrane organelle membrane Golgi apparatus endomembrane system perinuclear region of cytoplasm FAR/SIN/STRIPAK complex protein-containing complex
A	Calcium-binding protein 39	protein binding binding kinase binding enzyme binding protein serine/threonine kinase binding protein kinase binding enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity protein binding binding kinase binding enzyme binding protein serine/threonine kinase binding protein kinase binding enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity protein serine/threonine kinase activator activity	response to thyroid hormone response to stimulus response to hormone response to endogenous stimulus response to chemical response to activity cellular response to stimulus regulation of biological process regulation of cellular process signaling biological regulation cellular process signal transduction intracellular signal transduction response to thyroid hormone response to stimulus response to hormone response to endogenous stimulus response to chemical response to activity cellular response to stimulus regulation of biological process regulation of cellular process signaling biological regulation cellular process signal transduction intracellular signal transduction cell communication regulation of localization regulation of potassium ion transport transport monoatomic ion transmembrane transport negative regulation of monoatomic ion transport negative regulation of biological process potassium ion transmembrane transport negative regulation of transport regulation of monoatomic ion transmembrane transport metal ion transport negative regulation of transmembrane transport monoatomic cation transmembrane transport localization negative regulation of monoatomic ion transmembrane transport negative regulation of cellular process monoatomic ion transport negative regulation of cation transmembrane transport monoatomic cation transport regulation of metal ion transport negative regulation of potassium ion transport regulation of transport regulation of monoatomic ion transport negative regulation of potassium ion transmembrane transport regulation of potassium ion transmembrane transport establishment of localization transmembrane transport regulation of transmembrane transport potassium ion transport regulation of monoatomic cation transmembrane transport response to osmotic stress cellular hypotonic response cellular response to chemical stress cellular response to osmotic stress cellular response to environmental stimulus hypotonic response cellular response to chemical stimulus cellular response to stress response to stress response to abiotic stimulus cellular response to abiotic stimulus	intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band cellular anatomical structure organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band cellular anatomical structure organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular space vesicle extracellular membrane-bounded organelle vesicle lumen intracellular vesicle membrane-enclosed lumen cytoplasmic vesicle lumen secretory granule lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen cytoplasmic vesicle organelle lumen secretory granule secretory vesicle protein kinase complex transferase complex, transferring phosphorus-containing groups protein-containing complex catalytic complex serine/threonine protein kinase complex transferase complex cytosol ficolin-1-rich granule ficolin-1-rich granule lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C	IPR017441	Protein kinase, ATP binding site	Binding Site
C	IPR046409	Programmed cell death protein 10, dimerisation domain superfamily	Homologous Superfamily
C	IPR000719	Protein kinase domain	Domain
C	IPR050629	STE20/SPS1-related Proline-Alanine-rich Kinase	Family
C	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
C	IPR048288	Programmed cell death protein 10, dimerisation domain	Domain
C	IPR035056	MST4, kinase domain	Domain
B	IPR017441	Protein kinase, ATP binding site	Binding Site
B	IPR046409	Programmed cell death protein 10, dimerisation domain superfamily	Homologous Superfamily
B	IPR000719	Protein kinase domain	Domain
B	IPR050629	STE20/SPS1-related Proline-Alanine-rich Kinase	Family
B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
B	IPR048288	Programmed cell death protein 10, dimerisation domain	Domain
B	IPR035056	MST4, kinase domain	Domain
A	IPR016024	Armadillo-type fold	Homologous Superfamily
A	IPR011989	Armadillo-like helical	Homologous Superfamily
A	IPR013878	Mo25-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C	Pharos: Q9P289	plasma cell myeloma adenoma gastric adenocarcinoma large cell medulloblastoma lymphoplasmacytic lymphoma malignant pancreatic neoplasm ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia cystic fibrosis HER2-positive carcinoma of breast lung cancer malignant ependymoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma pituitary cancer plasma cell myeloma adenoma gastric adenocarcinoma large cell medulloblastoma lymphoplasmacytic lymphoma malignant pancreatic neoplasm ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia cystic fibrosis HER2-positive carcinoma of breast lung cancer malignant ependymoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma pituitary cancer ductal breast carcinoma in situ invasive ductal breast carcinoma lung carcinoma malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm
B	Pharos: Q9P289	plasma cell myeloma adenoma gastric adenocarcinoma large cell medulloblastoma lymphoplasmacytic lymphoma malignant pancreatic neoplasm ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia cystic fibrosis HER2-positive carcinoma of breast lung cancer malignant ependymoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma pituitary cancer plasma cell myeloma adenoma gastric adenocarcinoma large cell medulloblastoma lymphoplasmacytic lymphoma malignant pancreatic neoplasm ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia cystic fibrosis HER2-positive carcinoma of breast lung cancer malignant ependymoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma pituitary cancer ductal breast carcinoma in situ invasive ductal breast carcinoma lung carcinoma malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm
A	Pharos: Q9Y376	atypical teratoid rhabdoid tumor large cell medulloblastoma osteosarcoma hereditary spastic paraplegia lymphoplasmacytic lymphoma ovarian cancer IgA glomerulonephritis medulloblastoma ulcerative colitis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.