4ICA | pdb_00004ica

Crystal structure of a C-terminal truncated form of the matrix subunit (p15) of Feline Immunodeficiency Virus (FIV)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BAmidasee4icaB1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: AmidaseECOD (develop294)
AAmidasee4icaA1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: AmidaseECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.150.90 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
A1.10.150.90 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Matrix protein p15

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
A, B
IPR001878Zinc finger, CCHC-typeDomain
A, B
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
A, B
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
A, B
IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
A, B
IPR050195Primate lentivirus group Gag polyprotein-likeDomain
A, B
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily