4IHH
Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
G | d4ihhg_ | All alpha proteins | Acyl carrier protein-like | ACP-like | Acyl-carrier protein (ACP) | automated matches | (Escherichia coli str. 'clone D i14 ) [TaxId: 885275 ], | SCOPe (2.08) |
I | d4ihhi_ | All alpha proteins | Acyl carrier protein-like | ACP-like | Acyl-carrier protein (ACP) | automated matches | (Escherichia coli str. 'clone D i14 ) [TaxId: 885275 ], | SCOPe (2.08) |
J | d4ihhj1 | All alpha proteins | Acyl carrier protein-like | ACP-like | Acyl-carrier protein (ACP) | automated matches | (Escherichia coli str. 'clone D i14 ) [TaxId: 885275 ], | SCOPe (2.08) |
J | d4ihhj2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli str. 'clone D i14 ) [TaxId: 885275 ], | SCOPe (2.08) |
K | d4ihhk_ | All alpha proteins | Acyl carrier protein-like | ACP-like | Acyl-carrier protein (ACP) | automated matches | (Escherichia coli str. 'clone D i14 ) [TaxId: 885275 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8091508 | 3001804 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | MurE/MurF N-terminal domain | 8091500 | 3000146 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | MurE/MurF N-terminal domain | 8091500 | 3000146 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8091508 | 3001804 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8091508 | 3001804 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | MurE/MurF N-terminal domain | 8091500 | 3000146 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | MurE/MurF N-terminal domain | 8091500 | 3000146 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8091508 | 3001804 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8091508 | 3001804 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | MurE/MurF N-terminal domain | 8091500 | 3000146 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | MurE/MurF N-terminal domain | 8091500 | 3000146 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8091508 | 3001804 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00132 | e4ihhA2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
A | PF04613 | e4ihhA3 | A: a/b three-layered sandwiches | X: MurF and HprK N-domain-like (From Topology) | H: MurF and HprK N-domain-like (From Topology) | T: MurF and HprK N-domain-like | F: PF04613 | ECOD (1.6) |
C | PF00132 | e4ihhC2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
C | PF04613 | e4ihhC3 | A: a/b three-layered sandwiches | X: MurF and HprK N-domain-like (From Topology) | H: MurF and HprK N-domain-like (From Topology) | T: MurF and HprK N-domain-like | F: PF04613 | ECOD (1.6) |
D | PF00132 | e4ihhD2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
D | PF04613 | e4ihhD3 | A: a/b three-layered sandwiches | X: MurF and HprK N-domain-like (From Topology) | H: MurF and HprK N-domain-like (From Topology) | T: MurF and HprK N-domain-like | F: PF04613 | ECOD (1.6) |
E | PF00132 | e4ihhE2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
E | PF04613 | e4ihhE3 | A: a/b three-layered sandwiches | X: MurF and HprK N-domain-like (From Topology) | H: MurF and HprK N-domain-like (From Topology) | T: MurF and HprK N-domain-like | F: PF04613 | ECOD (1.6) |
F | PF00132 | e4ihhF2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
F | PF04613 | e4ihhF3 | A: a/b three-layered sandwiches | X: MurF and HprK N-domain-like (From Topology) | H: MurF and HprK N-domain-like (From Topology) | T: MurF and HprK N-domain-like | F: PF04613 | ECOD (1.6) |
B | PF00132 | e4ihhB2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
B | PF04613 | e4ihhB3 | A: a/b three-layered sandwiches | X: MurF and HprK N-domain-like (From Topology) | H: MurF and HprK N-domain-like (From Topology) | T: MurF and HprK N-domain-like | F: PF04613 | ECOD (1.6) |
G | PF00550 | e4ihhG1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PF00550 | ECOD (1.6) |
I | PF00550 | e4ihhI1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PF00550 | ECOD (1.6) |
J | PF00550 | e4ihhJ1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PF00550 | ECOD (1.6) |
K | PF00550 | e4ihhK1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PF00550 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00132 | Bacterial transferase hexapeptide (six repeats) (Hexapep) | Bacterial transferase hexapeptide (six repeats) | - | Repeat | |
PF04613 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD (LpxD) | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) catalyses an early step in lipid A biosynthesis: UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + (R)-3-hydroxytetradecanoyl- [acyl carrier protein] -> UDP-2,3-bis(3-hydroxytetradec ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily | |
IPR007691 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD | Family | |
IPR018357 | Hexapeptide transferase, conserved site | Conserved Site | |
IPR020573 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region | Domain | |
IPR001451 | Hexapeptide repeat | Repeat |