4JET | pdb_00004jet

2.2A resolution structure of Holo hemophore HasA from Yersinia pestis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
J	d4jetj_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
I	d4jeti_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
H	d4jeth_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
G	d4jetg_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
F	d4jetf_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
E	d4jete_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
D	d4jetd_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
C	d4jetc_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
B	d4jetb_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
A	d4jeta_	Alpha and beta proteins (a+b)	Heme-binding protein A (HasA)	Heme-binding protein A (HasA)	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
H	SCOP2 Family	Heme-binding protein A (HasA)	8085667	4001106	SCOP2 (2022-06-29)
H	SCOP2 Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2 (2022-06-29)
G	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Heme-binding protein A (HasA)	8085668	3000777	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J		e4jetJ1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
I		e4jetI1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
H		e4jetH1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
G		e4jetG1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
F		e4jetF1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
E		e4jetE1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
D		e4jetD1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
C		e4jetC1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
B		e4jetB1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)
A		e4jetA1	A: EF-hand	X: EF-hand-related	H: EF-hand	T: Peptidase_M10	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
I	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
H	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
G	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
F	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
E	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
D	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
C	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
B	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)
A	3.30.1500.10	Alpha Beta	2-Layer Sandwich	Heme-binding Protein A	Chain: A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	Hemophore HasA	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR010495	Haem-binding HasA	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR036912	Haem-binding HasA superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.