4JO6 | pdb_00004jo6

Streptavidin complex with SBP-Tag


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyAvidin/streptavidin 8040372 3001465 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAvidin/streptavidin 8040372 3001465 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAvidin/streptavidin 8040372 3001465 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAvidin/streptavidin 8040372 3001465 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPGM_PMM_IVe4jo6D1 A: alpha bundlesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: PGM_PMM_IVECOD (develop294)
CGlutaredoxine4jo6C1 A: alpha bundlesX: HTHH: HTHT: Three-helical HTHF: GlutaredoxinECOD (develop294)
BPGM_PMM_IVe4jo6B1 A: alpha bundlesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: PGM_PMM_IVECOD (develop294)
APGM_PMM_IVe4jo6A1 A: alpha bundlesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: PGM_PMM_IVECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.40.128.30 Mainly Beta Beta Barrel Lipocalin Avidin-likeCATH (4.3.0)
C2.40.128.30 Mainly Beta Beta Barrel Lipocalin Avidin-likeCATH (4.3.0)
B2.40.128.30 Mainly Beta Beta Barrel Lipocalin Avidin-likeCATH (4.3.0)
A2.40.128.30 Mainly Beta Beta Barrel Lipocalin Avidin-likeCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR017889Avidin-like, conserved siteConserved Site
A, B, C, D
IPR036896Avidin-like superfamilyHomologous Superfamily
A, B, C, D
IPR051764Avidin/Streptavidin-relatedFamily
A, B, C, D
IPR005468Avidin/streptavidinFamily
A, B, C, D
IPR005469AvidinFamily