4K3F | pdb_00004k3f

Crystal structure of a putative TonB-dependent receptor (PA5505) from Pseudomonas aeruginosa PAO1 at 1.60 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4k3fa1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], SCOPe (2.08)
Ad4k3fa2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPhosphate binding protein-like 8058945 4000229 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyType 2 solute binding protein-like 8058946 3000083 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALysR_substratee4k3fA1 A: alpha bundlesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF: LysR_substrateECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03180NlpA lipoprotein (Lipoprotein_9)NlpA lipoprotein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Probable TonB-dependent receptor- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR004872Lipoprotein NlpA familyFamily