Crystal structure of ABC transporter solute binding protein BB0719 from Bordetella bronchiseptica RB50, TARGET EFI-510049
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d4n4ub_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], | SCOPe (2.08) |
| A | d4n4ua1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], | SCOPe (2.08) |
| A | d4n4ua2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e4n4uB1 | A: Four-helical up-and-down bundle | X: Glycosyl hydrolase domain | H: Glycosyl hydrolase domain | T: | F: | ECOD (20:10:01) | |
| A | e4n4uA1 | A: Four-helical up-and-down bundle | X: Glycosyl hydrolase domain | H: Glycosyl hydrolase domain | T: LysR_substrate | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.190.170 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.170 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative ABC transporter periplasmic solute-binding protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR018389 | TRAP transporter solute receptor DctP | Family | |
| IPR038404 | TRAP transporter solute receptor DctP superfamily | Homologous Superfamily |
