Crystal structure of a putative lipoprotein (CD630_1653) from Clostridium difficile 630 at 2.20 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d4oteb_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Clostridioides difficile 630 ) [TaxId: 272563 ], | SCOPe (2.08) |
| A | d4otea_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Clostridioides difficile 630 ) [TaxId: 272563 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2 Family | Phosphate binding protein-like | 8058953 | 4000229 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Type 2 solute binding protein-like | 8058954 | 3000083 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058954 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e4oteB1 | A: Four-helical up-and-down bundle | X: Glycosyl hydrolase domain | H: Glycosyl hydrolase domain | T: SBP_bac_1 | F: | ECOD (20:10:01) | |
| A | e4oteA1 | A: Four-helical up-and-down bundle | X: Glycosyl hydrolase domain | H: Glycosyl hydrolase domain | T: SBP_bac_1 | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03180 | NlpA lipoprotein (Lipoprotein_9) | NlpA lipoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Lipoprotein | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR004872 | Lipoprotein NlpA family | Family |
