4QJE
1.85 Angstrom resolution crystal structure of apo betaine aldehyde dehydrogenase (betB) G234S mutant from Staphylococcus aureus (IDP00699) with BME-free sulfinic acid form of Cys289
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4qjea_ | Alpha and beta proteins (a/b) | ALDH-like | ALDH-like | automated matches | automated matches | (Staphylococcus aureus subsp. aureus COL ) [TaxId: 93062 ], | SCOPe (2.08) |
C | d4qjec_ | Alpha and beta proteins (a/b) | ALDH-like | ALDH-like | automated matches | automated matches | (Staphylococcus aureus subsp. aureus COL ) [TaxId: 93062 ], | SCOPe (2.08) |
D | d4qjed_ | Alpha and beta proteins (a/b) | ALDH-like | ALDH-like | automated matches | automated matches | (Staphylococcus aureus subsp. aureus COL ) [TaxId: 93062 ], | SCOPe (2.08) |
B | d4qjeb_ | Alpha and beta proteins (a/b) | ALDH-like | ALDH-like | automated matches | automated matches | (Staphylococcus aureus subsp. aureus COL ) [TaxId: 93062 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | ALDH-like | 8065597 | 4000806 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ALDH-like | 8065598 | 3001479 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | ALDH-like | 8065598 | 3001479 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ALDH-like | 8065598 | 3001479 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ALDH-like | 8065598 | 3001479 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Aldedh_2nd | e4qjeA2 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_2nd | ECOD (1.6) |
A | Aldedh_1st_1 | e4qjeA1 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_1st_1 | ECOD (1.6) |
C | Aldedh_2nd | e4qjeC1 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_2nd | ECOD (1.6) |
C | Aldedh_1st_1 | e4qjeC2 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_1st_1 | ECOD (1.6) |
D | Aldedh_2nd | e4qjeD2 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_2nd | ECOD (1.6) |
D | Aldedh_1st_1 | e4qjeD1 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_1st_1 | ECOD (1.6) |
B | Aldedh_2nd | e4qjeB1 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_2nd | ECOD (1.6) |
B | Aldedh_1st_1 | e4qjeB2 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_1st_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.605.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 1 | CATH (4.3.0) |
A | 3.40.309.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
C | 3.40.605.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 1 | CATH (4.3.0) |
C | 3.40.309.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
D | 3.40.605.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 1 | CATH (4.3.0) |
D | 3.40.309.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
B | 3.40.605.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 1 | CATH (4.3.0) |
B | 3.40.309.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aldehyde Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00171 | Aldehyde dehydrogenase family (Aldedh) | Aldehyde dehydrogenase family | - | Family | |
PF00171 | Aldehyde dehydrogenase family (Aldedh) | Aldehyde dehydrogenase family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011264 | Betaine aldehyde dehydrogenase | Family | |
IPR015590 | Aldehyde dehydrogenase domain | Domain | |
IPR016161 | Aldehyde/histidinol dehydrogenase | Homologous Superfamily | |
IPR029510 | Aldehyde dehydrogenase, glutamic acid active site | Conserved Site | |
IPR016162 | Aldehyde dehydrogenase, N-terminal | Homologous Superfamily | |
IPR016163 | Aldehyde dehydrogenase, C-terminal | Homologous Superfamily | |
IPR016160 | Aldehyde dehydrogenase, cysteine active site | Conserved Site | |
IPR011264 | Betaine aldehyde dehydrogenase | Family | |
IPR015590 | Aldehyde dehydrogenase domain | Domain | |
IPR016161 | Aldehyde/histidinol dehydrogenase | Homologous Superfamily | |
IPR029510 | Aldehyde dehydrogenase, glutamic acid active site | Conserved Site | |
IPR016162 | Aldehyde dehydrogenase, N-terminal | Homologous Superfamily | |
IPR016163 | Aldehyde dehydrogenase, C-terminal | Homologous Superfamily | |
IPR016160 | Aldehyde dehydrogenase, cysteine active site | Conserved Site |