4RIF | pdb_00004rif

Landomycin Glycosyltransferase LanGT2, carbasugar substrate complex

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d4rifb1	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Streptomyces cyanogenus ) [TaxId: 80860 ],	SCOPe (2.08)
B	d4rifb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Streptomyces cyanogenus ) [TaxId: 80860 ],	SCOPe (2.08)
A	d4rifa1	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Streptomyces cyanogenus ) [TaxId: 80860 ],	SCOPe (2.08)
A	d4rifa2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Streptomyces cyanogenus ) [TaxId: 80860 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e4rifB1	A: omega toxin-like	X: omega toxin-related	H: omega toxin-related	T:	F:	ECOD (20:10:01)
B		e4rifB2	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Class I glutamine amidotransferase-like	T: SBP_bac_1	F:	ECOD (20:10:01)
A		e4rifA1	A: HTH	X: HTH	H: winged helix domain	T: Adaptin_N, Cnd1	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
A	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Glycosyl transferase homolog	glycosyltransferase activity transferase activity hexosyltransferase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding UDP-glycosyltransferase activity	antibiotic metabolic process biosynthetic process metabolic process cellular process antibiotic biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR048284	Erythromycin biosynthesis protein CIII-like, N-terminal domain	Domain
A, B	IPR002213	UDP-glucuronosyl/UDP-glucosyltransferase	Family
A, B	IPR050426	Glycosyltransferase 28	Family
A, B	IPR010610	Erythromycin biosynthesis protein CIII-like, C-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.