4UW8 | pdb_00004uw8

Structure of the carboxy-terminal domain of the bacteriophage T5 L- shaped tail fiber with its intra-molecular chaperone domain


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae4uw8A1 A: Repetitive alpha hairpinsX: C2 domainH: C2 domainT:F:ECOD (20:10:01)
Be4uw8B1 A: Repetitive alpha hairpinsX: C2 domainH: C2 domainT:F:ECOD (20:10:01)
De4uw8D1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: MolybdopterinF:ECOD (20:10:01)
Ee4uw8E1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: MolybdopterinF:ECOD (20:10:01)
Fe4uw8F1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: MolybdopterinF:ECOD (20:10:01)
He4uw8H1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: MolybdopterinF:ECOD (20:10:01)
Ie4uw8I1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: MolybdopterinF:ECOD (20:10:01)
Ge4uw8G1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: MolybdopterinF:ECOD (20:10:01)
Ce4uw8C1 A: Repetitive alpha hairpinsX: C2 domainH: C2 domainT:F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF13884Chaperone of endosialidase (Peptidase_S74)Chaperone of endosialidaseThis is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the fi ...This is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the final residue of the End-tail-spike family, Pfam:PF12219. The endosialidase protein forms homotrimeric molecules in bacteriophages [1]. The catalytic dyad allows this portion of the molecule to be cleaved from the more N-terminal region such that the latter can fold and bind to polysialic acid in the bacterial outer envelope [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR030392Intramolecular chaperone auto-processing domainDomain