4V55 | pdb_00004v55

Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth AF]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
FB [auth CF]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
F [auth AG]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
GB [auth CG]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
IB [auth CI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
H [auth AI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
I [auth AJ]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
JB [auth CJ]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
J [auth AK]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
KB [auth CK]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
NB [auth CN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
M [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
N [auth AO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
OB [auth CO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
O [auth AP]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
PB [auth CP]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
R [auth AS]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
SB [auth CS]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
GC [auth D4]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
FA [auth B4]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
GA [auth B1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
HC [auth D1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
HA [auth B3]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
IC [auth D3]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
JC [auth DV]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
IA [auth BV]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
LC [auth DL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
KA [auth BL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
MA [auth BX]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
NC [auth DX]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
PC [auth DJ]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
OA [auth BJ]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
QA [auth BO]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
RC [auth DO]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
SC [auth DQ]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
RA [auth BQ]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
SA [auth BS]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
TC [auth DS]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
TA [auth BU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
UC [auth DU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
UA [auth BF]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
VC [auth DF]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
VA [auth BG]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
VA [auth BG]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
WC [auth DG]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
WC [auth DG]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
ZC [auth DZ]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
YA [auth BZ]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
AB [auth B6]SCOP2B SuperfamilyRibosome recycling factor, RRF 8035749 3001524 SCOP2B (2022-06-29)
BD [auth D6]SCOP2B SuperfamilyRibosome recycling factor, RRF 8035749 3001524 SCOP2B (2022-06-29)
HB [auth CH]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
G [auth AH]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
AD [auth DW]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
ZA [auth BW]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
YC [auth DT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
XA [auth BT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
XC [auth DR]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
WA [auth BR]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
PA [auth BN]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
QC [auth DN]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
OC [auth DH]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
OC [auth DH]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
NA [auth BH]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
NA [auth BH]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
MC [auth DM]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
LA [auth BM]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
EA [auth B0]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
FC [auth D0]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
EC [auth DY]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
DA [auth BY]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
DB [auth CD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
C [auth AD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
DC [auth DE]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
CA [auth BE]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
CC [auth DP]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
BA [auth BP]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
AA [auth BK]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
BC [auth DK]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
AC [auth DD]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
Z [auth BD]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
Y [auth BC]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
Y [auth BC]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
ZB [auth DC]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
ZB [auth DC]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
X [auth BI]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
X [auth BI]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
YB [auth DI]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
YB [auth DI]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
VB [auth CU]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
U [auth AU]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
UB [auth CB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
T [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
P [auth AQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
QB [auth CQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
MB [auth CM]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
L [auth AM]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
K [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
LB [auth CL]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EB [auth CE]e4v55CE1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
D [auth AE]e4v55AE1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
E [auth AF]e4v55AF1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
FB [auth CF]e4v55CF1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
F [auth AG]e4v55AG1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
GB [auth CG]e4v55CG1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
IB [auth CI]e4v55CI1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: FlaF_Ig-likeF:ECOD (20:10:01)
H [auth AI]e4v55AI1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: FlaF_Ig-likeF:ECOD (20:10:01)
I [auth AJ]e4v55AJ1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
JB [auth CJ]e4v55CJ1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
J [auth AK]e4v55AK1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
KB [auth CK]e4v55CK1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
NB [auth CN]e4v55CN1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
M [auth AN]e4v55AN1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
N [auth AO]e4v55AO1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
OB [auth CO]e4v55CO1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
O [auth AP]e4v55AP1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
PB [auth CP]e4v55CP1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
R [auth AS]e4v55AS1 A: beta-propeller-likeX: beta-propellerH: Nucleic acid-binding proteinT: CellulaseF:ECOD (20:10:01)
SB [auth CS]e4v55CS1 A: beta-propeller-likeX: beta-propellerH: Nucleic acid-binding proteinT: CellulaseF:ECOD (20:10:01)
S [auth AT]e4v55AT1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
TB [auth CT]e4v55CT1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
GC [auth D4]e4v55D41 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
FA [auth B4]e4v55B41 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
GA [auth B1]e4v55B11 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
HC [auth D1]e4v55D11 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
HA [auth B3]e4v55B31 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
IC [auth D3]e4v55D31 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
JC [auth DV]e4v55DV1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
IA [auth BV]e4v55BV1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
KC [auth D2]e4v55D21 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
JA [auth B2]e4v55B21 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
LC [auth DL]e4v55DL1 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
KA [auth BL]e4v55BL1 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
MA [auth BX]e4v55BX1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
NC [auth DX]e4v55DX1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
PC [auth DJ]e4v55DJ1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
OA [auth BJ]e4v55BJ1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
QA [auth BO]e4v55BO1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
RC [auth DO]e4v55DO1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
SC [auth DQ]e4v55DQ1 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
RA [auth BQ]e4v55BQ1 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
SA [auth BS]e4v55BS1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
TC [auth DS]e4v55DS1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
TA [auth BU]e4v55BU1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
UC [auth DU]e4v55DU1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
UA [auth BF]e4v55BF1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
VC [auth DF]e4v55DF1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
VA [auth BG]e4v55BG1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
WC [auth DG]e4v55DG1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
ZC [auth DZ]e4v55DZ1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
YA [auth BZ]e4v55BZ1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
AB [auth B6]e4v55B61 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
BD [auth D6]e4v55D61 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
HB [auth CH]e4v55CH1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
G [auth AH]e4v55AH1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
AD [auth DW]e4v55DW1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
ZA [auth BW]e4v55BW1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
YC [auth DT]e4v55DT1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
XA [auth BT]e4v55BT1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
XC [auth DR]e4v55DR1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
WA [auth BR]e4v55BR1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
PA [auth BN]e4v55BN1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
QC [auth DN]e4v55DN1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
OC [auth DH]e4v55DH2 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
OC [auth DH]e4v55DH3 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
NA [auth BH]e4v55BH2 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
NA [auth BH]e4v55BH3 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
MC [auth DM]e4v55DM1 A: HSP20-likeX: HSP20-like chaperonesH: HSP20-like chaperonesT: Dynamin_NF:ECOD (20:10:01)
LA [auth BM]e4v55BM1 A: HSP20-likeX: HSP20-like chaperonesH: HSP20-like chaperonesT: Dynamin_NF:ECOD (20:10:01)
EA [auth B0]e4v55B01 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
FC [auth D0]e4v55D01 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
EC [auth DY]e4v55DY1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
DA [auth BY]e4v55BY1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
DB [auth CD]e4v55CD1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: FlaF_Ig-likeF:ECOD (20:10:01)
C [auth AD]e4v55AD1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: FlaF_Ig-likeF:ECOD (20:10:01)
DC [auth DE]e4v55DE1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
CA [auth BE]e4v55BE1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
CC [auth DP]e4v55DP1 A: HSP20-likeX: HSP20-like chaperonesH: HSP20-like chaperonesT: Dynamin_NF:ECOD (20:10:01)
BA [auth BP]e4v55BP1 A: HSP20-likeX: HSP20-like chaperonesH: HSP20-like chaperonesT: Dynamin_NF:ECOD (20:10:01)
AA [auth BK]e4v55BK1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
BC [auth DK]e4v55DK1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
AC [auth DD]e4v55DD1 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
Z [auth BD]e4v55BD1 A: HSP20-likeX: profilin-likeH: C-terminal domain in DHH phosphoesterasesT: PemK_toxinF:ECOD (20:10:01)
Y [auth BC]e4v55BC1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
ZB [auth DC]e4v55DC1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
X [auth BI]e4v55BI1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
YB [auth DI]e4v55DI1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
VB [auth CU]e4v55CU1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
U [auth AU]e4v55AU1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
UB [auth CB]e4v55CB1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: FlaF_Ig-likeF:ECOD (20:10:01)
T [auth AB]e4v55AB1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: FlaF_Ig-likeF:ECOD (20:10:01)
B [auth AC]e4v55AC1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
CB [auth CC]e4v55CC1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
Q [auth AR]e4v55AR1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
RB [auth CR]e4v55CR1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
P [auth AQ]e4v55AQ1 A: beta-propeller-likeX: beta-propellerH: Nucleic acid-binding proteinT: CellulaseF:ECOD (20:10:01)
QB [auth CQ]e4v55CQ1 A: beta-propeller-likeX: beta-propellerH: Nucleic acid-binding proteinT: CellulaseF:ECOD (20:10:01)
MB [auth CM]e4v55CM1 A: beta-propeller-likeX: beta-propellerH: Nucleic acid-binding proteinT: CellulaseF:ECOD (20:10:01)
L [auth AM]e4v55AM1 A: beta-propeller-likeX: beta-propellerH: Nucleic acid-binding proteinT: CellulaseF:ECOD (20:10:01)
K [auth AL]e4v55AL1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)
LB [auth CL]e4v55CL1 A: Type III secretion system domain-likeX: Antibiotic binding domain of TipA-like multidrug resistance regulatorsH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: TTL, ATPgrasp_YheCDF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth AE],
EB [auth CE]		PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
D [auth AE],
EB [auth CE]		PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
E [auth AF],
FB [auth CF]		PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
H [auth AI],
IB [auth CI]		PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
I [auth AJ],
JB [auth CJ]		PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
J [auth AK],
KB [auth CK]		PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
M [auth AN],
NB [auth CN]		PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
N [auth AO],
OB [auth CO]		PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
O [auth AP],
PB [auth CP]		PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
R [auth AS],
SB [auth CS]		PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
FA [auth B4],
GC [auth D4]		PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
GA [auth B1],
HC [auth D1]		PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
HA [auth B3],
IC [auth D3]		PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
IA [auth BV],
JC [auth DV]		PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
JA [auth B2],
KC [auth D2]		PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
KA [auth BL],
LC [auth DL]		PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
MA [auth BX],
NC [auth DX]		PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
OA [auth BJ],
PC [auth DJ]		PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
RA [auth BQ],
SC [auth DQ]		PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
SA [auth BS],
TC [auth DS]		PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
TA [auth BU],
UC [auth DU]		PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
TA [auth BU],
UC [auth DU]		PF00467KOW motif (KOW)KOW motif- Family
UA [auth BF],
VC [auth DF]		PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
UA [auth BF],
VC [auth DF]		PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
VA [auth BG],
WC [auth DG]		PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
YA [auth BZ],
ZC [auth DZ]		PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
AB [auth B6],
BD [auth D6]		PF01765Ribosome recycling factor (RRF)Ribosome recycling factorThe ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth [1]. Thus ribosomes are "recycled" and ready for another round of protein synthe ...The ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth [1]. Thus ribosomes are "recycled" and ready for another round of protein synthesis.
Domain
G [auth AH],
HB [auth CH]		PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
XA [auth BT],
YC [auth DT]		PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
WA [auth BR],
XC [auth DR]		PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
PA [auth BN],
QC [auth DN]		PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
NA [auth BH],
OC [auth DH]		PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
NA [auth BH],
OC [auth DH]		PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
LA [auth BM],
MC [auth DM]		PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
EA [auth B0],
FC [auth D0]		PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
DA [auth BY],
EC [auth DY]		PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
C [auth AD],
DB [auth CD]		PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
C [auth AD],
DB [auth CD]		PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
CA [auth BE],
DC [auth DE]		PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BA [auth BP],
CC [auth DP]		PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
AC [auth DD],
Z [auth BD]		PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
Y [auth BC],
ZB [auth DC]		PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
Y [auth BC],
ZB [auth DC]		PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
X [auth BI],
YB [auth DI]		PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
X [auth BI],
YB [auth DI]		PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
T [auth AB],
UB [auth CB]		PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
B [auth AC],
CB [auth CC]		PF07650KH domain (KH_2)KH domainDomain
B [auth AC],
CB [auth CC]		PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
P [auth AQ],
QB [auth CQ]		PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
L [auth AM],
MB [auth CM]		PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
K [auth AL],
LB [auth CL]		PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth AE],
EB [auth CE]		30S ribosomal protein S5
E [auth AF],
FB [auth CF]		30S ribosomal protein S6
F [auth AG],
GB [auth CG]		30S ribosomal protein S7
H [auth AI],
IB [auth CI]		30S ribosomal protein S9
I [auth AJ],
JB [auth CJ]		30S ribosomal protein S10
J [auth AK],
KB [auth CK]		30S ribosomal protein S11
M [auth AN],
NB [auth CN]		30S ribosomal protein S14
N [auth AO],
OB [auth CO]		30S ribosomal protein S15
O [auth AP],
PB [auth CP]		30S ribosomal protein S16
R [auth AS],
SB [auth CS]		30S ribosomal protein S19
S [auth AT],
TB [auth CT]		30S ribosomal protein S20
W [auth BB],
XB [auth DB]		23S rRNA---
FA [auth B4],
GC [auth D4]		50S ribosomal protein L36
GA [auth B1],
HC [auth D1]		50S ribosomal protein L33
HA [auth B3],
IC [auth D3]		50S ribosomal protein L35
IA [auth BV],
JC [auth DV]		50S ribosomal protein L25
JA [auth B2],
KC [auth D2]		50S ribosomal protein L34
KA [auth BL],
LC [auth DL]		50S ribosomal protein L15
MA [auth BX],
NC [auth DX]		50S ribosomal protein L29
OA [auth BJ],
PC [auth DJ]		50S ribosomal protein L13
QA [auth BO],
RC [auth DO]		50S ribosomal protein L18
RA [auth BQ],
SC [auth DQ]		50S ribosomal protein L20
SA [auth BS],
TC [auth DS]		50S ribosomal protein L22
TA [auth BU],
UC [auth DU]		50S ribosomal protein L24
UA [auth BF],
VC [auth DF]		50S ribosomal protein L5
VA [auth BG],
WC [auth DG]		50S ribosomal protein L6
YA [auth BZ],
ZC [auth DZ]		50S ribosomal protein L28
AB [auth B6],
BD [auth D6]		50S ribosomal protein RRF
G [auth AH],
HB [auth CH]		30S ribosomal protein S8
AD [auth DW],
ZA [auth BW]		50S ribosomal protein L27
XA [auth BT],
YC [auth DT]		50S ribosomal protein L23
WA [auth BR],
XC [auth DR]		50S ribosomal protein L21
PA [auth BN],
QC [auth DN]		50S ribosomal protein L17
NA [auth BH],
OC [auth DH]		50S ribosomal protein L9
LA [auth BM],
MC [auth DM]		50S ribosomal protein L16
EA [auth B0],
FC [auth D0]		50S ribosomal protein L32
DA [auth BY],
EC [auth DY]		50S ribosomal protein L30
C [auth AD],
DB [auth CD]		30S ribosomal protein S4
CA [auth BE],
DC [auth DE]		50S ribosomal protein L4
BA [auth BP],
CC [auth DP]		50S ribosomal protein L19
AA [auth BK],
BC [auth DK]		50S ribosomal protein L14
AC [auth DD],
Z [auth BD]		50S ribosomal protein L3
Y [auth BC],
ZB [auth DC]		50S ribosomal protein L2
X [auth BI],
YB [auth DI]		50S ribosomal protein L11
V [auth BA],
WB [auth DA]		5S rRNA---
U [auth AU],
VB [auth CU]		30S ribosomal protein S21
T [auth AB],
UB [auth CB]		30S ribosomal protein S2
B [auth AC],
CB [auth CC]		30S ribosomal protein S3
Q [auth AR],
RB [auth CR]		30S ribosomal protein S18
P [auth AQ],
QB [auth CQ]		30S ribosomal protein S17
L [auth AM],
MB [auth CM]		30S ribosomal protein S13
K [auth AL],
LB [auth CL]		30S ribosomal protein S12
A [auth AA],
BB [auth CA]		16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth AE],
EB [auth CE]		IPR000851Small ribosomal subunit protein uS5Family
D [auth AE],
EB [auth CE]		IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
D [auth AE],
EB [auth CE]		IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
D [auth AE],
EB [auth CE]		IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth AE],
EB [auth CE]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth AE],
EB [auth CE]		IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
D [auth AE],
EB [auth CE]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
E [auth AF],
FB [auth CF]		IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
E [auth AF],
FB [auth CF]		IPR000529Small ribosomal subunit protein bS6Family
E [auth AF],
FB [auth CF]		IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
E [auth AF],
FB [auth CF]		IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
E [auth AF],
FB [auth CF]		IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
F [auth AG],
GB [auth CG]		IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
F [auth AG],
GB [auth CG]		IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
F [auth AG],
GB [auth CG]		IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
F [auth AG],
GB [auth CG]		IPR000235Small ribosomal subunit protein uS7Family
F [auth AG],
GB [auth CG]		IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth AI],
IB [auth CI]		IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
H [auth AI],
IB [auth CI]		IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
H [auth AI],
IB [auth CI]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth AI],
IB [auth CI]		IPR000754Small ribosomal subunit protein uS9Family
H [auth AI],
IB [auth CI]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
I [auth AJ],
JB [auth CJ]		IPR027486Small ribosomal subunit protein uS10 domainDomain
I [auth AJ],
JB [auth CJ]		IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
I [auth AJ],
JB [auth CJ]		IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
I [auth AJ],
JB [auth CJ]		IPR001848Small ribosomal subunit protein uS10Family
J [auth AK],
KB [auth CK]		IPR001971Small ribosomal subunit protein uS11Family
J [auth AK],
KB [auth CK]		IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
J [auth AK],
KB [auth CK]		IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
J [auth AK],
KB [auth CK]		IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth AN],
NB [auth CN]		IPR001209Small ribosomal subunit protein uS14Family
M [auth AN],
NB [auth CN]		IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
M [auth AN],
NB [auth CN]		IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
N [auth AO],
OB [auth CO]		IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
N [auth AO],
OB [auth CO]		IPR000589Small ribosomal subunit protein uS15Family
N [auth AO],
OB [auth CO]		IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
O [auth AP],
PB [auth CP]		IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
O [auth AP],
PB [auth CP]		IPR000307Small ribosomal subunit protein bS16Family
O [auth AP],
PB [auth CP]		IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
R [auth AS],
SB [auth CS]		IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
R [auth AS],
SB [auth CS]		IPR002222Small ribosomal subunit protein uS19Family
R [auth AS],
SB [auth CS]		IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
R [auth AS],
SB [auth CS]		IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
S [auth AT],
TB [auth CT]		IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
S [auth AT],
TB [auth CT]		IPR002583Small ribosomal subunit protein bS20Family
FA [auth B4],
GC [auth D4]		IPR000473Large ribosomal subunit protein bL36Family
FA [auth B4],
GC [auth D4]		IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
GA [auth B1],
HC [auth D1]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth B1],
HC [auth D1]		IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
GA [auth B1],
HC [auth D1]		IPR001705Large ribosomal subunit protein bL33Family
GA [auth B1],
HC [auth D1]		IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
HA [auth B3],
IC [auth D3]		IPR021137Large ribosomal subunit protein bL35-likeFamily
HA [auth B3],
IC [auth D3]		IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
HA [auth B3],
IC [auth D3]		IPR001706Large ribosomal subunit protein bL35Family
HA [auth B3],
IC [auth D3]		IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
IA [auth BV],
JC [auth DV]		IPR020055Ribosomal protein bL25, short-formFamily
IA [auth BV],
JC [auth DV]		IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
IA [auth BV],
JC [auth DV]		IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
IA [auth BV],
JC [auth DV]		IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
IA [auth BV],
JC [auth DV]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
JA [auth B2],
KC [auth D2]		IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
JA [auth B2],
KC [auth D2]		IPR000271Large ribosomal subunit protein bL34Family
KA [auth BL],
LC [auth DL]		IPR021131Large ribosomal subunit protein uL15/eL18Domain
KA [auth BL],
LC [auth DL]		IPR030878Large ribosomal subunit protein uL15Family
KA [auth BL],
LC [auth DL]		IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
KA [auth BL],
LC [auth DL]		IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
KA [auth BL],
LC [auth DL]		IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
MA [auth BX],
NC [auth DX]		IPR050063Universal ribosomal protein uL29Family
MA [auth BX],
NC [auth DX]		IPR001854Large ribosomal subunit protein uL29Family
MA [auth BX],
NC [auth DX]		IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
MA [auth BX],
NC [auth DX]		IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
OA [auth BJ],
PC [auth DJ]		IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
OA [auth BJ],
PC [auth DJ]		IPR005822Large ribosomal subunit protein uL13Family
OA [auth BJ],
PC [auth DJ]		IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
OA [auth BJ],
PC [auth DJ]		IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
QA [auth BO],
RC [auth DO]		IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
QA [auth BO],
RC [auth DO]		IPR057268Large ribosomal subunit protein uL18Family
QA [auth BO],
RC [auth DO]		IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
RA [auth BQ],
SC [auth DQ]		IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
RA [auth BQ],
SC [auth DQ]		IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
RA [auth BQ],
SC [auth DQ]		IPR005813Large ribosomal subunit protein bL20Family
SA [auth BS],
TC [auth DS]		IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
SA [auth BS],
TC [auth DS]		IPR001063Large ribosomal subunit protein uL22Family
SA [auth BS],
TC [auth DS]		IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
SA [auth BS],
TC [auth DS]		IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
SA [auth BS],
TC [auth DS]		IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
TA [auth BU],
UC [auth DU]		IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
TA [auth BU],
UC [auth DU]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth BU],
UC [auth DU]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth BU],
UC [auth DU]		IPR003256Large ribosomal subunit protein uL24Family
TA [auth BU],
UC [auth DU]		IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
TA [auth BU],
UC [auth DU]		IPR005824KOWDomain
TA [auth BU],
UC [auth DU]		IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
UA [auth BF],
VC [auth DF]		IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
UA [auth BF],
VC [auth DF]		IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
UA [auth BF],
VC [auth DF]		IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
UA [auth BF],
VC [auth DF]		IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
UA [auth BF],
VC [auth DF]		IPR002132Large ribosomal subunit protein uL5Family
UA [auth BF],
VC [auth DF]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
VA [auth BG],
WC [auth DG]		IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
VA [auth BG],
WC [auth DG]		IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
VA [auth BG],
WC [auth DG]		IPR000702Large ribosomal subunit protein uL6-likeFamily
VA [auth BG],
WC [auth DG]		IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
VA [auth BG],
WC [auth DG]		IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
YA [auth BZ],
ZC [auth DZ]		IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
YA [auth BZ],
ZC [auth DZ]		IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
YA [auth BZ],
ZC [auth DZ]		IPR026569Large ribosomal subunit protein bL28Family
YA [auth BZ],
ZC [auth DZ]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AB [auth B6],
BD [auth D6]		IPR023584Ribosome recycling factor domainDomain
AB [auth B6],
BD [auth D6]		IPR036191RRF superfamilyHomologous Superfamily
AB [auth B6],
BD [auth D6]		IPR002661Ribosome recycling factorFamily
G [auth AH],
HB [auth CH]		IPR000630Small ribosomal subunit protein uS8Family
G [auth AH],
HB [auth CH]		IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
G [auth AH],
HB [auth CH]		IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
AD [auth DW],
ZA [auth BW]		IPR001684Large ribosomal subunit protein bL27Family
AD [auth DW],
ZA [auth BW]		IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
XA [auth BT],
YC [auth DT]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth BT],
YC [auth DT]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
XA [auth BT],
YC [auth DT]		IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
XA [auth BT],
YC [auth DT]		IPR013025Large ribosomal subunit protein uL23-likeFamily
WA [auth BR],
XC [auth DR]		IPR028909Large ribosomal subunit protein bL21-likeFamily
WA [auth BR],
XC [auth DR]		IPR001787Large ribosomal subunit protein bL21Family
WA [auth BR],
XC [auth DR]		IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
WA [auth BR],
XC [auth DR]		IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
PA [auth BN],
QC [auth DN]		IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
PA [auth BN],
QC [auth DN]		IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
PA [auth BN],
QC [auth DN]		IPR000456Large ribosomal subunit protein bL17Family
NA [auth BH],
OC [auth DH]		IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
NA [auth BH],
OC [auth DH]		IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
NA [auth BH],
OC [auth DH]		IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
NA [auth BH],
OC [auth DH]		IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
NA [auth BH],
OC [auth DH]		IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
NA [auth BH],
OC [auth DH]		IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
NA [auth BH],
OC [auth DH]		IPR000244Large ribosomal subunit protein bL9Family
LA [auth BM],
MC [auth DM]		IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
LA [auth BM],
MC [auth DM]		IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
LA [auth BM],
MC [auth DM]		IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
LA [auth BM],
MC [auth DM]		IPR016180Large ribosomal subunit protein uL16 domainDomain
LA [auth BM],
MC [auth DM]		IPR047873Large ribosomal subunit protein uL16Family
EA [auth B0],
FC [auth D0]		IPR002677Large ribosomal subunit protein bL32Family
EA [auth B0],
FC [auth D0]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth B0],
FC [auth D0]		IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
DA [auth BY],
EC [auth DY]		IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
DA [auth BY],
EC [auth DY]		IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
DA [auth BY],
EC [auth DY]		IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
DA [auth BY],
EC [auth DY]		IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
C [auth AD],
DB [auth CD]		IPR002942RNA-binding S4 domainDomain
C [auth AD],
DB [auth CD]		IPR022801Small ribosomal subunit protein uS4Family
C [auth AD],
DB [auth CD]		IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
C [auth AD],
DB [auth CD]		IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
C [auth AD],
DB [auth CD]		IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
C [auth AD],
DB [auth CD]		IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
CA [auth BE],
DC [auth DE]		IPR013005Large ribosomal subunit protein uL4-likeFamily
CA [auth BE],
DC [auth DE]		IPR002136Large ribosomal subunit protein uL4Family
CA [auth BE],
DC [auth DE]		IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
BA [auth BP],
CC [auth DP]		IPR001857Large ribosomal subunit protein bL19Family
BA [auth BP],
CC [auth DP]		IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
BA [auth BP],
CC [auth DP]		IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
BA [auth BP],
CC [auth DP]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth BK],
BC [auth DK]		IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
AA [auth BK],
BC [auth DK]		IPR000218Large ribosomal subunit protein uL14Family
AA [auth BK],
BC [auth DK]		IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
AA [auth BK],
BC [auth DK]		IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
AC [auth DD],
Z [auth BD]		IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
AC [auth DD],
Z [auth BD]		IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
AC [auth DD],
Z [auth BD]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
AC [auth DD],
Z [auth BD]		IPR000597Large ribosomal subunit protein uL3Family
Y [auth BC],
ZB [auth DC]		IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
Y [auth BC],
ZB [auth DC]		IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Y [auth BC],
ZB [auth DC]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth BC],
ZB [auth DC]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth BC],
ZB [auth DC]		IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Y [auth BC],
ZB [auth DC]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth BC],
ZB [auth DC]		IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Y [auth BC],
ZB [auth DC]		IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Y [auth BC],
ZB [auth DC]		IPR002171Large ribosomal subunit protein uL2Family
X [auth BI],
YB [auth DI]		IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
X [auth BI],
YB [auth DI]		IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
X [auth BI],
YB [auth DI]		IPR000911Ribosomal protein uL11Family
X [auth BI],
YB [auth DI]		IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
X [auth BI],
YB [auth DI]		IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
X [auth BI],
YB [auth DI]		IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
X [auth BI],
YB [auth DI]		IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
U [auth AU],
VB [auth CU]		IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
U [auth AU],
VB [auth CU]		IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
U [auth AU],
VB [auth CU]		IPR001911Small ribosomal subunit protein bS21Family
T [auth AB],
UB [auth CB]		IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
T [auth AB],
UB [auth CB]		IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
T [auth AB],
UB [auth CB]		IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
T [auth AB],
UB [auth CB]		IPR001865Small ribosomal subunit protein uS2Family
B [auth AC],
CB [auth CC]		IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
B [auth AC],
CB [auth CC]		IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
B [auth AC],
CB [auth CC]		IPR057258Small ribosomal subunit protein uS3Family
B [auth AC],
CB [auth CC]		IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
B [auth AC],
CB [auth CC]		IPR004087K Homology domainDomain
B [auth AC],
CB [auth CC]		IPR004044K Homology domain, type 2Domain
B [auth AC],
CB [auth CC]		IPR015946K homology domain-like, alpha/betaHomologous Superfamily
B [auth AC],
CB [auth CC]		IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
B [auth AC],
CB [auth CC]		IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
Q [auth AR],
RB [auth CR]		IPR001648Small ribosomal subunit protein bS18Family
Q [auth AR],
RB [auth CR]		IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
Q [auth AR],
RB [auth CR]		IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
P [auth AQ],
QB [auth CQ]		IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
P [auth AQ],
QB [auth CQ]		IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
P [auth AQ],
QB [auth CQ]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth AQ],
QB [auth CQ]		IPR000266Small ribosomal subunit protein uS17Family
L [auth AM],
MB [auth CM]		IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
L [auth AM],
MB [auth CM]		IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
L [auth AM],
MB [auth CM]		IPR001892Small ribosomal subunit protein uS13Family
L [auth AM],
MB [auth CM]		IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
L [auth AM],
MB [auth CM]		IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
K [auth AL],
LB [auth CL]		IPR005679Ribosomal protein uS12, bacteriaFamily
K [auth AL],
LB [auth CL]		IPR006032Small ribosomal subunit protein uS12Family
K [auth AL],
LB [auth CL]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily