4V7Z

Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
IB [auth CJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
J [auth AJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
JB [auth CK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
K [auth AK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
KB [auth CL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
L [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
LB [auth CM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
M [auth AM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
OB [auth CP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
P [auth AP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
QB [auth CR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
R [auth AR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
RB [auth CS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
AB [auth CB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
SB [auth CT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
T [auth AT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
UB [auth D0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
V [auth B0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
VB [auth D1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
W [auth B1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
WB [auth D2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
X [auth B2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
AA [auth B5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
ZB [auth D5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
AC [auth D6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
BA [auth B6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
BB [auth CC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
BB [auth CC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
CC [auth D8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
DA [auth B8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
FC [auth DD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
FC [auth DD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
GA [auth BD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
GA [auth BD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
GC [auth DE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
HA [auth BE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
HC [auth DF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
IA [auth BF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
KC [auth DI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
KC [auth DI]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
LA [auth BI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
LA [auth BI]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
LC [auth DN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
MA [auth BN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
CB [auth CD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
MC [auth DO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
NA [auth BO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
NC [auth DP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
OA [auth BP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
OC [auth DQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
PA [auth BQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
PC [auth DR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
QA [auth BR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
QC [auth DS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
RA [auth BS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
RC [auth DT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
SA [auth BT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
SC [auth DU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
TA [auth BU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
TC [auth DV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
UA [auth BV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
UC [auth DW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
VA [auth BW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
VC [auth DX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
WA [auth BX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
DB [auth CE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
DB [auth CE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
WC [auth DY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
XA [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
FB [auth CG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
HB [auth CI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
I [auth AI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IB [auth CJ]Ribosomal_S10e4v7zCJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
J [auth AJ]Ribosomal_S10e4v7zAJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
JB [auth CK]Ribosomal_S11e4v7zCK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
K [auth AK]Ribosomal_S11e4v7zAK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
KB [auth CL]Ribosom_S12_S23e4v7zCL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
L [auth AL]Ribosom_S12_S23e4v7zAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
LB [auth CM]Ribosomal_S13_1e4v7zCM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
M [auth AM]Ribosomal_S13_1e4v7zAM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
MB [auth CN]Ribosomal_S14e4v7zCN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
N [auth AN]Ribosomal_S14e4v7zAN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
NB [auth CO]Ribosomal_S15_1e4v7zCO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
O [auth AO]Ribosomal_S15_1e4v7zAO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
OB [auth CP]Ribosomal_S16_1e4v7zCP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
P [auth AP]Ribosomal_S16_1e4v7zAP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
PB [auth CQ]Ribosomal_S17_1e4v7zCQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
Q [auth AQ]Ribosomal_S17_1e4v7zAQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
QB [auth CR]Ribosomal_S18e4v7zCR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
R [auth AR]Ribosomal_S18e4v7zAR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
RB [auth CS]Ribosomal_S19e4v7zCS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
S [auth AS]Ribosomal_S19e4v7zAS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
AB [auth CB]Ribosomal_S2e4v7zCB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
B [auth AB]Ribosomal_S2e4v7zAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
SB [auth CT]Ribosomal_S20pe4v7zCT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
T [auth AT]Ribosomal_S20pe4v7zAT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
UB [auth D0]Ribosomal_L27e4v7zD01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
V [auth B0]Ribosomal_L27e4v7zB01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
VB [auth D1]Ribosomal_L28e4v7zD11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
W [auth B1]Ribosomal_L28e4v7zB11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
WB [auth D2]Ribosomal_L29e4v7zD21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
X [auth B2]Ribosomal_L29e4v7zB21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
XB [auth D3]Ribosomal_L30e4v7zD31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Y [auth B3]Ribosomal_L30e4v7zB31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
YB [auth D4]Ribosomal_L31e4v7zD41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
Z [auth B4]Ribosomal_L31e4v7zB41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AA [auth B5]Ribosomal_L32pe4v7zB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
ZB [auth D5]Ribosomal_L32pe4v7zD51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
AC [auth D6]Ribosomal_L33e4v7zD61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
BA [auth B6]Ribosomal_L33e4v7zB61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
BC [auth D7]Ribosomal_L34e4v7zD71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
CA [auth B7]Ribosomal_L34e4v7zB71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
BB [auth CC]Ribosomal_S3_Ce4v7zCC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
BB [auth CC]KH_2_1e4v7zCC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
C [auth AC]Ribosomal_S3_Ce4v7zAC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth AC]KH_2_1e4v7zAC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
CC [auth D8]Ribosomal_L35pe4v7zD81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
DA [auth B8]Ribosomal_L35pe4v7zB81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
FC [auth DD]Ribosomal_L2_1e4v7zDD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
FC [auth DD]Ribosomal_L2_Ce4v7zDD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
GA [auth BD]Ribosomal_L2_1e4v7zBD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
GA [auth BD]Ribosomal_L2_Ce4v7zBD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
GC [auth DE]Ribosomal_L3e4v7zDE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
HA [auth BE]Ribosomal_L3e4v7zBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
HC [auth DF]Ribosomal_L4e4v7zDF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
IA [auth BF]Ribosomal_L4e4v7zBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
IC [auth DG]Ribosomal_L5_Ce4v7zDG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
JA [auth BG]Ribosomal_L5_Ce4v7zBG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
JC [auth DH]Ribosomal_L6e4v7zDH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
JC [auth DH]Ribosomal_L6_1e4v7zDH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
KA [auth BH]Ribosomal_L6e4v7zBH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
KA [auth BH]Ribosomal_L6_1e4v7zBH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
KC [auth DI]Ribosomal_L9_Ne4v7zDI1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
KC [auth DI]Ribosomal_L9_Ce4v7zDI2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
LA [auth BI]Ribosomal_L9_Ne4v7zBI1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
LA [auth BI]Ribosomal_L9_Ce4v7zBI2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
LC [auth DN]Ribosomal_L13e4v7zDN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
MA [auth BN]Ribosomal_L13e4v7zBN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
CB [auth CD]S4e4v7zCD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
D [auth AD]S4e4v7zAD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
MC [auth DO]Ribosomal_L14e4v7zDO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
NA [auth BO]Ribosomal_L14e4v7zBO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
NC [auth DP]Ribosomal_L27Ae4v7zDP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
OA [auth BP]Ribosomal_L27Ae4v7zBP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
OC [auth DQ]Ribosomal_L16e4v7zDQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
PA [auth BQ]Ribosomal_L16e4v7zBQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
PC [auth DR]Ribosomal_L17_1e4v7zDR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
QA [auth BR]Ribosomal_L17_1e4v7zBR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
QC [auth DS]Ribosomal_L18pe4v7zDS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
RA [auth BS]Ribosomal_L18pe4v7zBS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
RC [auth DT]Ribosomal_L19e4v7zDT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
SA [auth BT]Ribosomal_L19e4v7zBT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
SC [auth DU]Ribosomal_L20e4v7zDU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
TA [auth BU]Ribosomal_L20e4v7zBU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
TC [auth DV]Ribosomal_L21pe4v7zDV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
UA [auth BV]Ribosomal_L21pe4v7zBV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
UC [auth DW]Ribosomal_L22e4v7zDW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
VA [auth BW]Ribosomal_L22e4v7zBW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
VC [auth DX]Ribosomal_L23_2e4v7zDX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
WA [auth BX]Ribosomal_L23_2e4v7zBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
DB [auth CE]Ribosomal_S5_Ce4v7zCE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
DB [auth CE]Ribosomal_S5e4v7zCE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
E [auth AE]Ribosomal_S5_Ce4v7zAE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth AE]Ribosomal_S5e4v7zAE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
WC [auth DY]ribosomal_L24e4v7zDY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
XA [auth BY]ribosomal_L24e4v7zBY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
XC [auth DZ]Ribosomal_L25pe4v7zDZ2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
XC [auth DZ]Ribosomal_TL5_Ce4v7zDZ1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
YA [auth BZ]Ribosomal_L25pe4v7zBZ2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
YA [auth BZ]Ribosomal_TL5_Ce4v7zBZ1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
EB [auth CF]Ribosomal_S6e4v7zCF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
F [auth AF]Ribosomal_S6e4v7zAF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
FB [auth CG]Ribosomal_S7_1e4v7zCG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
G [auth AG]Ribosomal_S7_1e4v7zAG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
GB [auth CH]Ribosomal_S8_Ne4v7zCH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
GB [auth CH]Ribosomal_S8_Ce4v7zCH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
H [auth AH]Ribosomal_S8_Ne4v7zAH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth AH]Ribosomal_S8_Ce4v7zAH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
HB [auth CI]Ribosomal_S9e4v7zCI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
I [auth AI]Ribosomal_S9e4v7zAI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
IB [auth CJ],
J [auth AJ]
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
JB [auth CK],
K [auth AK]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
KB [auth CL],
L [auth AL]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
LB [auth CM],
M [auth AM]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
NB [auth CO],
O [auth AO]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
OB [auth CP],
P [auth AP]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
QB [auth CR],
R [auth AR]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
AB [auth CB],
B [auth AB]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
UB [auth D0],
V [auth B0]
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
XB [auth D3],
Y [auth B3]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
YB [auth D4],
Z [auth B4]
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AA [auth B5],
ZB [auth D5]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BC [auth D7],
CA [auth B7]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
BB [auth CC],
C [auth AC]
PF07650KH domain (KH_2)KH domain- Domain
BB [auth CC],
C [auth AC]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
CC [auth D8],
DA [auth B8]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
FC [auth DD],
GA [auth BD]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
FC [auth DD],
GA [auth BD]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
GC [auth DE],
HA [auth BE]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
HC [auth DF],
IA [auth BF]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
IC [auth DG],
JA [auth BG]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
IC [auth DG],
JA [auth BG]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
KC [auth DI],
LA [auth BI]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
KC [auth DI],
LA [auth BI]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
LC [auth DN],
MA [auth BN]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
CB [auth CD],
D [auth AD]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
CB [auth CD],
D [auth AD]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MC [auth DO],
NA [auth BO]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
NC [auth DP],
OA [auth BP]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PC [auth DR],
QA [auth BR]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
RC [auth DT],
SA [auth BT]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
SC [auth DU],
TA [auth BU]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
TC [auth DV],
UA [auth BV]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
UC [auth DW],
VA [auth BW]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
VC [auth DX],
WA [auth BX]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DB [auth CE],
E [auth AE]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
DB [auth CE],
E [auth AE]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
WC [auth DY],
XA [auth BY]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
WC [auth DY],
XA [auth BY]
PF00467KOW motif (KOW)KOW motif- Family
XC [auth DZ],
YA [auth BZ]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
XC [auth DZ],
YA [auth BZ]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
EB [auth CF],
F [auth AF]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
HB [auth CI],
I [auth AI]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA],
ZA [auth CA]
16S rRNA---
IB [auth CJ],
J [auth AJ]
30S ribosomal protein S10
JB [auth CK],
K [auth AK]
30S ribosomal protein S11
KB [auth CL],
L [auth AL]
30S ribosomal protein S12
LB [auth CM],
M [auth AM]
30S ribosomal protein S13
MB [auth CN],
N [auth AN]
30S ribosomal protein S14---
NB [auth CO],
O [auth AO]
30S ribosomal protein S15
OB [auth CP],
P [auth AP]
30S ribosomal protein S16
PB [auth CQ],
Q [auth AQ]
30S ribosomal protein S17---
QB [auth CR],
R [auth AR]
30S ribosomal protein S18
RB [auth CS],
S [auth AS]
30S ribosomal protein S19
AB [auth CB],
B [auth AB]
30S ribosomal protein S2
SB [auth CT],
T [auth AT]
30S ribosomal protein S20
TB [auth CU],
U [auth AU]
30S ribosomal protein Thx -
UB [auth D0],
V [auth B0]
50S ribosomal protein L27
VB [auth D1],
W [auth B1]
50S ribosomal protein L28
WB [auth D2],
X [auth B2]
50S ribosomal protein L29
XB [auth D3],
Y [auth B3]
50S ribosomal protein L30
YB [auth D4],
Z [auth B4]
50S ribosomal protein L31
AA [auth B5],
ZB [auth D5]
50S ribosomal protein L32
AC [auth D6],
BA [auth B6]
50S ribosomal protein L33
BC [auth D7],
CA [auth B7]
50S ribosomal protein L34
BB [auth CC],
C [auth AC]
30S ribosomal protein S3
CC [auth D8],
DA [auth B8]
50S ribosomal protein L35
DC [auth DA],
EA [auth BA]
23S ribosomal RNA---
EC [auth DB],
FA [auth BB]
5S ribosomal RNA---
FC [auth DD],
GA [auth BD]
50S ribosomal protein L2
GC [auth DE],
HA [auth BE]
50S ribosomal protein L3
HC [auth DF],
IA [auth BF]
50S ribosomal protein L4
IC [auth DG],
JA [auth BG]
50S ribosomal protein L5
JC [auth DH],
KA [auth BH]
50S ribosomal protein L6---
KC [auth DI],
LA [auth BI]
50S ribosomal protein L9
LC [auth DN],
MA [auth BN]
50S ribosomal protein L13
CB [auth CD],
D [auth AD]
30S ribosomal protein S4
MC [auth DO],
NA [auth BO]
50S ribosomal protein L14
NC [auth DP],
OA [auth BP]
50S ribosomal protein L15
OC [auth DQ],
PA [auth BQ]
50S ribosomal protein L16
PC [auth DR],
QA [auth BR]
50S ribosomal protein L17
QC [auth DS],
RA [auth BS]
50S ribosomal protein L18
RC [auth DT],
SA [auth BT]
50S ribosomal protein L19
SC [auth DU],
TA [auth BU]
50S ribosomal protein L20
TC [auth DV],
UA [auth BV]
50S ribosomal protein L21
UC [auth DW],
VA [auth BW]
50S ribosomal protein L22
VC [auth DX],
WA [auth BX]
50S ribosomal protein L23
DB [auth CE],
E [auth AE]
30S ribosomal protein S5
WC [auth DY],
XA [auth BY]
50S ribosomal protein L24
XC [auth DZ],
YA [auth BZ]
50S ribosomal protein L25
EB [auth CF],
F [auth AF]
30S ribosomal protein S6
FB [auth CG],
G [auth AG]
30S ribosomal protein S7
GB [auth CH],
H [auth AH]
30S ribosomal protein S8---
HB [auth CI],
I [auth AI]
30S ribosomal protein S9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IB [auth CJ],
J [auth AJ]
IPR001848Small ribosomal subunit protein uS10Family
IB [auth CJ],
J [auth AJ]
IPR027486Small ribosomal subunit protein uS10 domainDomain
IB [auth CJ],
J [auth AJ]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
IB [auth CJ],
J [auth AJ]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
JB [auth CK],
K [auth AK]
IPR001971Small ribosomal subunit protein uS11Family
JB [auth CK],
K [auth AK]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
JB [auth CK],
K [auth AK]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
JB [auth CK],
K [auth AK]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
KB [auth CL],
L [auth AL]
IPR006032Small ribosomal subunit protein uS12Family
KB [auth CL],
L [auth AL]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KB [auth CL],
L [auth AL]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
LB [auth CM],
M [auth AM]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
LB [auth CM],
M [auth AM]
IPR001892Small ribosomal subunit protein uS13Family
LB [auth CM],
M [auth AM]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
LB [auth CM],
M [auth AM]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
LB [auth CM],
M [auth AM]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
NB [auth CO],
O [auth AO]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
NB [auth CO],
O [auth AO]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
NB [auth CO],
O [auth AO]
IPR000589Small ribosomal subunit protein uS15Family
OB [auth CP],
P [auth AP]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
OB [auth CP],
P [auth AP]
IPR000307Small ribosomal subunit protein bS16Family
QB [auth CR],
R [auth AR]
IPR001648Small ribosomal subunit protein bS18Family
QB [auth CR],
R [auth AR]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
QB [auth CR],
R [auth AR]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
RB [auth CS],
S [auth AS]
IPR002222Small ribosomal subunit protein uS19Family
RB [auth CS],
S [auth AS]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
RB [auth CS],
S [auth AS]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
RB [auth CS],
S [auth AS]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AB [auth CB],
B [auth AB]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
AB [auth CB],
B [auth AB]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
AB [auth CB],
B [auth AB]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
AB [auth CB],
B [auth AB]
IPR001865Small ribosomal subunit protein uS2Family
SB [auth CT],
T [auth AT]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
SB [auth CT],
T [auth AT]
IPR002583Small ribosomal subunit protein bS20Family
TB [auth CU],
U [auth AU]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
TB [auth CU],
U [auth AU]
IPR031414Small ribosomal subunit protein bTHXFamily
UB [auth D0],
V [auth B0]
IPR001684Large ribosomal subunit protein bL27Family
UB [auth D0],
V [auth B0]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
VB [auth D1],
W [auth B1]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
VB [auth D1],
W [auth B1]
IPR050096Bacterial ribosomal protein bL28Family
VB [auth D1],
W [auth B1]
IPR026569Large ribosomal subunit protein bL28Family
VB [auth D1],
W [auth B1]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
WB [auth D2],
X [auth B2]
IPR050063Universal ribosomal protein uL29Family
WB [auth D2],
X [auth B2]
IPR001854Large ribosomal subunit protein uL29Family
WB [auth D2],
X [auth B2]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
WB [auth D2],
X [auth B2]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
XB [auth D3],
Y [auth B3]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
XB [auth D3],
Y [auth B3]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
XB [auth D3],
Y [auth B3]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
XB [auth D3],
Y [auth B3]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
YB [auth D4],
Z [auth B4]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
YB [auth D4],
Z [auth B4]
IPR027491Large ribosomal subunit protein bL31 type AFamily
YB [auth D4],
Z [auth B4]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
YB [auth D4],
Z [auth B4]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth B5],
ZB [auth D5]
IPR002677Large ribosomal subunit protein bL32Family
AA [auth B5],
ZB [auth D5]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth B5],
ZB [auth D5]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
AC [auth D6],
BA [auth B6]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth D6],
BA [auth B6]
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
AC [auth D6],
BA [auth B6]
IPR001705Large ribosomal subunit protein bL33Family
AC [auth D6],
BA [auth B6]
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
BC [auth D7],
CA [auth B7]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
BC [auth D7],
CA [auth B7]
IPR000271Large ribosomal subunit protein bL34Family
BB [auth CC],
C [auth AC]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
BB [auth CC],
C [auth AC]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
BB [auth CC],
C [auth AC]
IPR004087K Homology domainDomain
BB [auth CC],
C [auth AC]
IPR004044K Homology domain, type 2Domain
BB [auth CC],
C [auth AC]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
BB [auth CC],
C [auth AC]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
BB [auth CC],
C [auth AC]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
BB [auth CC],
C [auth AC]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CC [auth D8],
DA [auth B8]
IPR021137Large ribosomal subunit protein bL35-likeFamily
CC [auth D8],
DA [auth B8]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
CC [auth D8],
DA [auth B8]
IPR001706Large ribosomal subunit protein bL35Family
CC [auth D8],
DA [auth B8]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
FC [auth DD],
GA [auth BD]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
FC [auth DD],
GA [auth BD]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FC [auth DD],
GA [auth BD]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FC [auth DD],
GA [auth BD]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
FC [auth DD],
GA [auth BD]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
FC [auth DD],
GA [auth BD]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FC [auth DD],
GA [auth BD]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
FC [auth DD],
GA [auth BD]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
FC [auth DD],
GA [auth BD]
IPR002171Large ribosomal subunit protein uL2Family
GC [auth DE],
HA [auth BE]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
GC [auth DE],
HA [auth BE]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
GC [auth DE],
HA [auth BE]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
GC [auth DE],
HA [auth BE]
IPR000597Large ribosomal subunit protein uL3Family
HC [auth DF],
IA [auth BF]
IPR013005Large ribosomal subunit protein uL4-likeFamily
HC [auth DF],
IA [auth BF]
IPR002136Large ribosomal subunit protein uL4Family
HC [auth DF],
IA [auth BF]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IC [auth DG],
JA [auth BG]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IC [auth DG],
JA [auth BG]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IC [auth DG],
JA [auth BG]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IC [auth DG],
JA [auth BG]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IC [auth DG],
JA [auth BG]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
IC [auth DG],
JA [auth BG]
IPR002132Large ribosomal subunit protein uL5Family
KC [auth DI],
LA [auth BI]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
KC [auth DI],
LA [auth BI]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
KC [auth DI],
LA [auth BI]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
KC [auth DI],
LA [auth BI]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
KC [auth DI],
LA [auth BI]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
KC [auth DI],
LA [auth BI]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
KC [auth DI],
LA [auth BI]
IPR000244Large ribosomal subunit protein bL9Family
LC [auth DN],
MA [auth BN]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
LC [auth DN],
MA [auth BN]
IPR005822Large ribosomal subunit protein uL13Family
LC [auth DN],
MA [auth BN]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
LC [auth DN],
MA [auth BN]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
CB [auth CD],
D [auth AD]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
CB [auth CD],
D [auth AD]
IPR002942RNA-binding S4 domainDomain
CB [auth CD],
D [auth AD]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
CB [auth CD],
D [auth AD]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
CB [auth CD],
D [auth AD]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
CB [auth CD],
D [auth AD]
IPR022801Small ribosomal subunit protein uS4Family
MC [auth DO],
NA [auth BO]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
MC [auth DO],
NA [auth BO]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
MC [auth DO],
NA [auth BO]
IPR000218Large ribosomal subunit protein uL14Family
MC [auth DO],
NA [auth BO]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
NC [auth DP],
OA [auth BP]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
NC [auth DP],
OA [auth BP]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
NC [auth DP],
OA [auth BP]
IPR030878Large ribosomal subunit protein uL15Family
NC [auth DP],
OA [auth BP]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
NC [auth DP],
OA [auth BP]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
OC [auth DQ],
PA [auth BQ]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
OC [auth DQ],
PA [auth BQ]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
OC [auth DQ],
PA [auth BQ]
IPR016180Large ribosomal subunit protein uL16 domainDomain
OC [auth DQ],
PA [auth BQ]
IPR047873Large ribosomal subunit protein uL16Family
PC [auth DR],
QA [auth BR]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
PC [auth DR],
QA [auth BR]
IPR000456Large ribosomal subunit protein bL17Family
QC [auth DS],
RA [auth BS]
IPR005484Large ribosomal subunit protein uL18Family
QC [auth DS],
RA [auth BS]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
RC [auth DT],
SA [auth BT]
IPR001857Large ribosomal subunit protein bL19Family
RC [auth DT],
SA [auth BT]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
RC [auth DT],
SA [auth BT]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
RC [auth DT],
SA [auth BT]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
SC [auth DU],
TA [auth BU]
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
SC [auth DU],
TA [auth BU]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
SC [auth DU],
TA [auth BU]
IPR005813Large ribosomal subunit protein bL20Family
TC [auth DV],
UA [auth BV]
IPR028909Large ribosomal subunit protein bL21-likeFamily
TC [auth DV],
UA [auth BV]
IPR001787Large ribosomal subunit protein bL21Family
TC [auth DV],
UA [auth BV]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
UC [auth DW],
VA [auth BW]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
UC [auth DW],
VA [auth BW]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
UC [auth DW],
VA [auth BW]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
UC [auth DW],
VA [auth BW]
IPR001063Large ribosomal subunit protein uL22Family
UC [auth DW],
VA [auth BW]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
VC [auth DX],
WA [auth BX]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
VC [auth DX],
WA [auth BX]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
VC [auth DX],
WA [auth BX]
IPR013025Large ribosomal subunit protein uL23-likeFamily
DB [auth CE],
E [auth AE]
IPR000851Small ribosomal subunit protein uS5Family
DB [auth CE],
E [auth AE]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
DB [auth CE],
E [auth AE]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
DB [auth CE],
E [auth AE]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
DB [auth CE],
E [auth AE]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
DB [auth CE],
E [auth AE]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
DB [auth CE],
E [auth AE]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
WC [auth DY],
XA [auth BY]
IPR003256Large ribosomal subunit protein uL24Family
WC [auth DY],
XA [auth BY]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
WC [auth DY],
XA [auth BY]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WC [auth DY],
XA [auth BY]
IPR005824KOWDomain
WC [auth DY],
XA [auth BY]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WC [auth DY],
XA [auth BY]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
XC [auth DZ],
YA [auth BZ]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
XC [auth DZ],
YA [auth BZ]
IPR001021Ribosomal protein bL25, long-formFamily
XC [auth DZ],
YA [auth BZ]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
XC [auth DZ],
YA [auth BZ]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
XC [auth DZ],
YA [auth BZ]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
XC [auth DZ],
YA [auth BZ]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
XC [auth DZ],
YA [auth BZ]
IPR050070Bacterial ribosomal protein bL25Family
EB [auth CF],
F [auth AF]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
EB [auth CF],
F [auth AF]
IPR000529Small ribosomal subunit protein bS6Family
EB [auth CF],
F [auth AF]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
EB [auth CF],
F [auth AF]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
EB [auth CF],
F [auth AF]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
FB [auth CG],
G [auth AG]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
FB [auth CG],
G [auth AG]
IPR000235Small ribosomal subunit protein uS7Family
FB [auth CG],
G [auth AG]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
FB [auth CG],
G [auth AG]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
FB [auth CG],
G [auth AG]
IPR023798Small ribosomal subunit protein uS7 domainDomain
HB [auth CI],
I [auth AI]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
HB [auth CI],
I [auth AI]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
HB [auth CI],
I [auth AI]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HB [auth CI],
I [auth AI]
IPR000754Small ribosomal subunit protein uS9Family
HB [auth CI],
I [auth AI]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily