4XZE | pdb_00004xze

The crystal structure of Hazara virus nucleoprotein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2 Family	Nucleocapsid protein N-like	8050438	4006893	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Nucleocapsid protein N-like	8052910	3002151	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	Nucleocapsid protein N-like	8052911	3002151	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Nucleocapsid protein N-like	8052911	3002151	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Nucleocapsid protein N-like	8052911	3002151	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Nucleocapsid protein N-like	8052911	3002151	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	CPV_Polyhedrin	e4xzeD1	A: alpha bundles	X: ssDNA-binding transcriptional regulator domain-like	H: ssDNA-binding transcriptional regulator domain	T: ssDNA-binding transcriptional regulator domain	F: CPV_Polyhedrin	ECOD (develop294)
C	CPV_Polyhedrin	e4xzeC1	A: alpha bundles	X: ssDNA-binding transcriptional regulator domain-like	H: ssDNA-binding transcriptional regulator domain	T: ssDNA-binding transcriptional regulator domain	F: CPV_Polyhedrin	ECOD (develop294)
B	CPV_Polyhedrin	e4xzeB1	A: alpha bundles	X: ssDNA-binding transcriptional regulator domain-like	H: ssDNA-binding transcriptional regulator domain	T: ssDNA-binding transcriptional regulator domain	F: CPV_Polyhedrin	ECOD (develop294)
A	CPV_Polyhedrin	e4xzeA1	A: alpha bundles	X: ssDNA-binding transcriptional regulator domain-like	H: ssDNA-binding transcriptional regulator domain	T: ssDNA-binding transcriptional regulator domain	F: CPV_Polyhedrin	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	1.20.58.1110	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (utative)
B	1.20.58.1110	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (utative)
A	1.20.58.1110	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF02477	Nucleocapsid N protein (Nairo_nucleo)	Nucleocapsid N protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Nucleoprotein	hydrolase activity catalytic activity RNA binding binding nucleic acid binding	-	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR003486	Nucleocapsid N protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.